UFO07075.5prime Sequence
1105 bp (985 high quality bases) assembled on 2009-09-15
> UFO07075.5prime
CAGTCGACATGCCAAGATTTCAAATAAAGAGTTTGGTCTTTCTGGCCGGA
CTTATAGTTTTGGTTGGGGAGGCTAATTCCACCCTACGCCGAATACCCAT
TCAAAAGTCGCCAAACTTTAAGCGCAGCCACAAAAATATTGTGGCAGAAA
GGGATTTTGTTCAGCAGAAATACAATCGCCAATACACCGCTAATGGGTAT
CCCATGGAGCACCTGTCCAACTACGATAACTTTCAGTATTATGGAAATAT
AAGCATTGGAACCCCCGGCCAGGACTTTTTGGTACAATTCGACACCGGTT
CCTCAAACCTTTGGGTTCCGGGAAGCTCGTGTATCAGCACAGCGTGTCAG
GATCACCAGGTCTTCTACAAAAATAAATCCAGTACCTATGTGGCCAATGG
AACGGCCTTTTCCATAACCTATGGAACTGGCAGTGTTTCTGGTTATCTAT
CCGTGGATTGTGTAGGCTTTGCTGGCTTGACGATACAAAGTCAGACATTC
GGTGAGGTAACTACCGAGCAGGGAACAAATTTCGTAGATGCATACTTCGA
CGGAATACTGGGCATGGGATTCCCCTCTTTGGCCGTGGACGGAGTTACCC
CGACGTTTCAGAACATGATGCAGCAGGGACTCGTTCAAAGCCCAGTGTTT
TCATTTTTTCTGAGGGATAACGGCAGTGTAACTTTTTACGGAGGTGAACT
TATTTTGGGCGGCTCGGATCCCTCGCTTTACAGCGGTTCCCTCACCTATG
TGAATGTCGTTCACGCCGCATATTGGAAATTCCAAACGGATTATATCAAA
GTCGGTAGTACTTCCATTAGCACCTTTGCCCAAGCAATTGCGGATACTGG
AACATCTCTGATTATAGCTCCCCAGGCGCAATATGATCAGATTTCTCAAT
TGTTTATGCTAATTCGGAGGACTTTTCGAATGCAGTTCCACTTCCTACCC
GATCTATATCACATTATGGCGGGACTTTAAAATCCCAGCAATATTATATC
ATCGAGAGAGATTTCTGTCGCTGCATCATCTATAACAGACTTGATTAGGG
AATGTATTTTTGGTCGATTTACGAATTCGAAGTGGGCCAATCAGGCTGGA
TCGCA
UFO07075.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:59:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| pcl-RA | 1310 | CG13374-RA | 38..1154 | 7..1093 | 4840 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:59:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 436465..437411 | 951..7 | 4620 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:59:09 has no hits.
UFO07075.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:23:24 Download gff for
UFO07075.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pcl-RA | 26..1041 | 1..1006 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:41 Download gff for
UFO07075.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pcl-RA | 32..1047 | 1..1006 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:55:51 Download gff for
UFO07075.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pcl-RA | 32..1047 | 1..1006 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:55:51 Download gff for
UFO07075.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 436402..437416 | 1..1006 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:41 Download gff for
UFO07075.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 330435..331449 | 1..1006 | 98 | | Minus |
