UFO07081.5prime Sequence
1105 bp (999 high quality bases) assembled on 2009-09-15
> UFO07081.5prime
CAGTCGACATGGCTGAGGAAGGACCACCGGAGCCGAGCATTGATTTTGTC
CCAGCTCTTTGCTTTGTACCACGCGGCGTGGCTAAGGATCGTCCCGACAA
GATCGTGCTGACGCAGGCGGAGCTGGCCAGGATTATCGGTGATACGCAAC
AGGAATTGGACGAGGAGAGCGACGACGATGCAGAGGAGGGCGAAAATGCC
GAGGAAGACCAAAACGACATGGATGTGGACGACCACGCGGATGCCAATAG
TGAGAACCGCGATCCGCAGGACGAGTTCCAATTCCAGGAGTATGACAACG
AGGCGAATGCTAATGTCACCAGTCTGGCCAACATCGTGGACGCTGGCGAG
CAAATCCCCGATGAGGACGAAGACTCCGAGGCCGAGGACGAGGTGATCAA
GCCCAGCGACAACCTCATTCTAGTGGGTCACGTTCAAGACGACGCCGCCT
CCATGGAGGTGTGGGTTTTCAACCAGGAGGAGGAGGCTCTCTACACCCAC
CACGACTTTCTGCTGCCAAGCTTTCCTCTGTGCATCGAGTGGATGAATCA
CGACGCGGGCAGCGAAAAGGCGGGCAACATGTGCGCCATCGGCTGCATGG
ATCCGATAATCACAGTCTGGGATCTAGACATACAGGACGCTATCGAGCCC
ACATTTAAGCTGGGTTCCAAAGGCAGCCGGAAGCAGAACAAAGAGCAGTA
TGGACACAAGGACGCCGTGCTGGATCTCTCTTGGAAACACCAACTTTGAG
CACATTCTGGCCAGCGGGTCCGTGGACCAAACTGTGATTCTGTGGGACAT
GGACGAGGGCCAGCCCTCATACAACCATTACCGCTTTTGGCAAACAGATT
CAGTCGCTGGGAATTCCATCCGGCAAGAGGCTCAAAGCATTCTTACCGGC
TGTGCCGATGGAAACGTGCGACTCTTCGATTGCCGCCGACGCTGACGGCG
TCAACTCGTCAGCATTGAATTGAAAAGTTGACGGTGAAGTGAGAAGGTCC
TTGTGGCATCCCCACACAGACGACTACTTCATCGTGGGCACCAACGATTG
CACTTTGCATAACGCGACAACGTTCTCTGAACACTGGCTGTGGTCGTAAG
GCCTA
UFO07081.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:56:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| nclb-RA | 1549 | CG6751-RA | 90..1174 | 9..1095 | 4950 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:56:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10875837..10876888 | 9..1065 | 4645 | 98.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:56:13 has no hits.
UFO07081.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:23:21 Download gff for
UFO07081.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6751-RA | 80..1156 | 1..1083 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:56:06 Download gff for
UFO07081.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| nclb-RA | 86..1162 | 1..1083 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:33:25 Download gff for
UFO07081.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| nclb-RA | 86..1162 | 1..1083 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:33:25 Download gff for
UFO07081.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10875833..10876918 | 1..1092 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:56:06 Download gff for
UFO07081.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6763338..6764423 | 1..1092 | 97 | -> | Plus |
