UFO07083.5prime Sequence
1126 bp (994 high quality bases) assembled on 2009-09-15
> UFO07083.5prime
CAGTCGACATGGTTGTATCCGTGAAGGTCTTTAAGAAGGCCACGCCCAAC
GGCAAGGTCACCTTTTATCTGGGACGCCGCGACTTCATCGACCACATCGA
CTACTGTGATCCCGTCGATGGAGTGATTGTGGTGGAACCGGACTATCTAA
AGAACAGGAAAGTCTTTGGCCAACTGGCCACCACCTATCGCTATGGTCGC
GAGGAGGACGAGGTCATGGGAGTGAAGTTCTCCAAGGAGCTTATCCTGTG
CCGGGAGCAAATTGTGCCCATGACAAATCCCAACATGGAGATGACACCGA
TGCAGGAGAAGCTGGTCCGCAAACTGGGCAGCAACGCCTATCCGTTCACC
TTCCACTTCCCGCCCAATTCGCCCAGCTCCGTTACTCTGCAGCAGGAGGG
CGACGACAATGGCAAGCCCCTGGGCGTCGAGTACACCATCCGGGCATTTG
TGGGCGACTCCGAGGACGATCGCCAGCACAAGCGGAGCATGGTCAGTCTG
GTGATCAAGAAGCTGCAGTACGCTCCCCTCAATCGTGGCCAGCGTCTGCC
CAGCTCGCTGGTCAGCAAGGGATTCACCTTCTCGAATGGCAAGATCAGTC
TGGAGGTTACGCTGGACAGGGAGATCTACTATCATGGCGAGAAGACGGCT
GCCACCGTCCAGGTGTCGAACAACTCCAAGAAGTCCGTGAAGAGCATCAA
GTGCTTCATTGTGCAGCACACTGAGATCACCATGGTGAACGCCCAGTTCA
GCAAGCATGTGGCCCAGCTGGAGACCAAGGAGGGCTGCCCCATCACTCCG
GGCGCCAATCTCACCAAGACCTTCTACTTGATTCCGCTGGCGGCTAACAA
CAAGGATCGCCATGGTATCGCCCTGGATGGTCACTTGAAGGACGAGGATG
TCAACCTGGCTTCATCCACCATGGTGCAGAGGGCAAGTCCACGGGAGATG
CCTGTGGTATTGTCATCTCGTACTCGTGCGCATTAGCTCAACTGCGCACT
CTGGGAGGTGAATGCAGACGATGTGCCTTCAGCTACTCACGGCACTGACA
TGGAAGACGCTCGAATGCATTGAGAAATGAGTCATCGGACGACGCATGTC
AAGGCTATAAGATGAATGACGATAAT
UFO07083.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:56:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Arr2-RA | 1547 | CG5962-RA | 112..1149 | 9..1038 | 4975 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:56:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 8647967..8648825 | 867..9 | 4280 | 99.9 | Minus |
3L | 28110227 | 3L | 8647751..8647903 | 1012..864 | 565 | 97.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:56:39 has no hits.
UFO07083.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:23:27 Download gff for
UFO07083.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Arr2-RA | 102..1159 | 1..1045 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:56:24 Download gff for
UFO07083.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Arr2-RA | 102..1159 | 1..1045 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:33:39 Download gff for
UFO07083.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Arr2-RA | 102..1159 | 1..1045 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:33:39 Download gff for
UFO07083.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 8647711..8647902 | 865..1045 | 94 | <- | Minus |
3L | 8647970..8648829 | 1..864 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:56:24 Download gff for
UFO07083.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 8640811..8641002 | 865..1045 | 94 | <- | Minus |
arm_3L | 8641070..8641929 | 1..864 | 99 | | Minus |