UFO07086.5prime Sequence
1087 bp (975 high quality bases) assembled on 2009-09-15
> UFO07086.5prime
CAGTCGACATGTTATCGACCAAGTTAGTTTGCATCGCACTGGTCAGCCTG
GCTTTTGGCCAAGTTTATCTGGTGGCCAGCGAGGAAACCATTACCCTTTG
TCCCACCAACTTTACCCAGGTGGCGGATAAGTGTCTCCTGGTGGATGGCA
GTTGGAAGAACTTCTACGAGTCGGATCGCCATTGTCGATCCCTTAACGCC
GGACTTCTGAGCATTAGCAATCCAACGGAATTCAATGTCATCAACGAATG
GCTGCCGATCATTGCACCATACCAGCCGGAGTTCTGGACATCCGGAAACA
AGCTGGGCGGAACTTCCGATTACTACTGGCAGAGTACTGGGCAGAAGGCT
GTCTACCTTCCCTGGAGTGCTGGTCAACCCACTACCACCGCCGGTGATTG
TCTTACACTGATGGCCAACGTCACCATGACTCCCGAAGAAGCCATATTGA
GTGTGCACCGCCTAACGGTAAAGCCCTGCACCCAATGGGCACCCCACATC
TGCCAGGCTCCACTGGAAATCTTCAAGACCCAGCTTTGTCTCAATACCAC
AGCTTTCTTCGAGGCGAAGATACCCGTTGCAAGCTTTCTAGACCATTCGT
TTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAAT
CATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATT
CTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCA
GATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAG
CTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTA
ATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGA
ACCTGATCGCAGCGGCATCAGCACTTGTCGCTTGCGTATATATTTGCCCA
TGTGAACGGGGCGAGAGTGGTCATATGCACGTTAATCAACTGTGAACTCA
CCAGGATGCTGAAACGAAAACTATTCTCATTATCCTTTAGAATAGGCCAG
GTTCACCGTACCGCCCAATCTGCATATTGTAAATCTG
UFO07086.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:51:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14500-RA | 677 | CG14500-RA | 13..582 | 9..578 | 2850 | 100 | Plus |
| CG14499-RB | 867 | CR14499-RB | 16..578 | 9..576 | 1300 | 82.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:51:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18188990..18189559 | 9..578 | 2850 | 100 | Plus |
| 2R | 25286936 | 2R | 18187722..18188284 | 9..576 | 1275 | 82 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:51:05 has no hits.
UFO07086.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:23:18 Download gff for
UFO07086.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14500-RA | 12..585 | 9..583 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:16:02 Download gff for
UFO07086.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14500-RA | 13..586 | 9..583 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:40:49 Download gff for
UFO07086.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14500-RA | 13..586 | 9..583 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:40:49 Download gff for
UFO07086.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18188990..18189563 | 9..583 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:16:02 Download gff for
UFO07086.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14076495..14077068 | 9..583 | 99 | == | Plus |
