UFO07088.5prime Sequence
1105 bp (999 high quality bases) assembled on 2009-09-15
> UFO07088.5prime
CAGTCGACATGCACAGATTAGTGGTTCTTTTAGTTTGCCTGGCTGTGGGT
TCCGCCTGTGCTGGCACAGTCGGGGTCTCCAATGGTGATCCCTTCGAGCG
CGAAGGTCGCATTGTCGGCGGCGAGGATACAACAATCGGAGCGCATCCCT
ACCAGGTTTCCCTGCAGACCAAGAGTGGCTCCCACTTCTGTGGTGGTAGT
TTGATCAACGAAGATACTGTTGTCACGGCGGCCCACTGTCTGGTGGGAAG
GAAGGTCTCCAAGGTGTTCGTGCGTCTCGGTTCCACGCTCTACAATGAGG
GTGGAATTGTGGTTGCTGTCCGGGAGTTGGCATACAATGAGGACTATAAC
TCGAAGACCATGGAGTACGACGTGGGCATACTGAAGCTGGACGAGAAGGT
AAAGGAAACCGAAAATATTCGATATATCGAACTGGCCACGGAAACGCCGC
CCACTGGCACCACCGCTGTGGTCACCGGCTGGGGTTCCAAGTGCTACTTC
TGGTGCATGACACTGCCCAAGACGCTCCAGGAGGTCTATGTCAACATTGT
GGACTGGAAGACGTGCGCTTCGGATGAGTACAAGTACGGAGAGATCATCT
ACGATAGCATGGTGTGTGCCTATGAAAAGAAGAAGGACGCTTGCCAAGGA
GATTCCGGTGGTCCTCTGGCGGTCGGTAACACTCTGGTGGGAATCGTGTC
CTGGGGATATGCCTGTGCCTCGAACCTACTGCCCGGTGTTTACTCCGATG
TGCCCGCTTTGCGAAAGTGGATCCTGAATGCAAGCGAAACTTTGGCAAGC
TTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCA
TAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCAT
GACTAGTGCTTGGATTCTCACAATAAAAAACGCCCGGCGCACCGAGCGTT
CTGAACAATCCAGATGGAGTTCTGAGTCATACTGGATCTATCACAGGAGT
CAGCGAGCTCGATATCAAATACGCCCCGCCTGCCACTCATCGCAGTACTG
TTGTATCATAGGCATCTTGCGACTGAAGCATCAAACGCATGATGACTGAT
CGCAT
UFO07088.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:58:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| thetaTry-RA | 1047 | CG12385-RA | 19..804 | 9..794 | 3930 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:58:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11341957..11342742 | 794..9 | 3930 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:58:56 has no hits.
UFO07088.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:23:16 Download gff for
UFO07088.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| thetaTry-RA | 11..800 | 1..794 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:37 Download gff for
UFO07088.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| thetaTry-RA | 15..804 | 1..794 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:55:44 Download gff for
UFO07088.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| thetaTry-RA | 15..804 | 1..794 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:55:44 Download gff for
UFO07088.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11341957..11342746 | 1..794 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:37 Download gff for
UFO07088.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7229462..7230251 | 1..794 | 99 | | Minus |
