UFO07090.5prime Sequence
1098 bp (993 high quality bases) assembled on 2009-09-15
> UFO07090.5prime
CAGTCGACATGTCGGTTGGAACTGTTCTACTAACGGCGCTGCTGGCGCTA
GTTGGTTACCTGCTGATGAAATGGCGAAGCACGATGAGGCACTGGCAGGA
TTTGGGTATTCCCTGTGAGGAGCCACACATACTAATGGGAAGCATGAAGG
GCGTACGAACCGCACGATCCTTTAACGAGATCTGGACGAGCTATTACAAT
AAGTTCCGTGGCTCCGGACCCTTTGCAGGTTTCTATTGGTTCCGGCGACC
GGCTGTTTTTGTCCTGGAAACATCGCTGGCGAAGCAGATCCTGATCAAGG
AGTTCAACAAGTTCACAGACCGAGGCTTCTTTCACAATCCCGAGGATGAT
CCGTTGTCCGGTCAGTTGTTTTTACTTGATGGCCAAAAGTGGAGGACCAT
GCGAAACAAGCTCTCCTCCACATTTACGTCCGGCAAAATGAAGTATATGT
TTCCCACTGTGGTCAAGGTGGCCAATGAATTCACCGATGTTTTTGGCCAA
AATGTGGCTAAGTCCCCTGTTGTCGAAGTGAGGGAGCTGTTGGCGCGATT
CACCACCGATGTTATTGGCACCTGCGCCTTCGGCATCGAGTGCAGCAGCC
TGAAGGACCCCGATGCAGAATTCCGCGAGATGGGTCGACGATCCCTAACG
GAGCAGCGCCTGGGACCAGTTGGAATCGGATTCGTCAATAGCTTTCCCAA
TTTGGCACGTCGCCTCCATATGAAAATGACAGCGGAGCCCATCGAAAGGT
TCTTCATGCGCATCGTTAGGGAAACAGTGGCCTTCCGAGAGCAAAACAAT
ATTCGTCGCAACGATTTCATGGATCAGTTGATCGATTTGAAAAACAAACC
ACTGATGGTATCACAATCCGGGGAGAGTGTTAACCTAACCATCGAGGAGA
TCGCAGCGCAGCTTTTGTATTCTTTGCGGCTGGTTTCGAAACCTCGTCGA
CACATGGGATTCGCACTGTATGACTGACCAGATCAGACATCAGACGGTGG
AGAGATGCAGAGTTATTGAAAGTGCAACGGGGAGTGACTATGAAGGTATG
GAGATTTGTCTATCTAGACAGGTTGTATCGAAATCCTCGATTGAACCG
UFO07090.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:55:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6a21-RA | 1631 | CG10247-RA | 82..1192 | 8..1093 | 4860 | 97.2 | Plus |
| Cyp6a9-RB | 1964 | CG10246-RB | 129..1014 | 91..973 | 1190 | 75.8 | Plus |
| Cyp6a2-RA | 1674 | CG9438-RA | 587..646 | 533..592 | 195 | 88.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:55:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14885898..14886866 | 973..8 | 4715 | 99.6 | Minus |
| 2R | 25286936 | 2R | 14880359..14881244 | 973..91 | 1135 | 75.7 | Minus |
| 2R | 25286936 | 2R | 6780846..6780905 | 592..533 | 195 | 88.3 | Minus |
| 2L | 23513712 | 2L | 5623077..5623174 | 634..537 | 190 | 79.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:55:23 has no hits.
UFO07090.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:23:15 Download gff for
UFO07090.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a21-RA | 78..1054 | 1..973 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:30 Download gff for
UFO07090.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a21-RA | 74..1050 | 1..973 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:41:39 Download gff for
UFO07090.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a21-RA | 74..1050 | 1..973 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:41:39 Download gff for
UFO07090.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14885898..14886874 | 1..973 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:30 Download gff for
UFO07090.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10773403..10774379 | 1..973 | 99 | | Minus |
