UFO07092.5prime Sequence
1098 bp (994 high quality bases) assembled on 2009-09-15
> UFO07092.5prime
CAGTCGACATGAAATTCATCTGGGCCCTGATTTTGGTGCTCGGTTCCATT
GCAGCGAACGCTGAGCGTGATAATTACTGCGAAAGGAACGAGACGATACG
AGCCACAGTGCCAGTGACCAAACAGCGGATCATAGTAAAGCAGCCATCCA
AGTGGAAGATCTGGAAGAAGACTGAGAAGATCACAGAGATCTACGATTCA
GAGGAGGAACAAGTCACCCACAGGTTGGTTAGGGAGTGCTGCCCCGGCTA
CTTGCAGGTGGAGTCCGGCTTGTGTGAGCCCATCTGCAGTCGGGGCTGTC
CCGCCCACGCCAGTTGTGCCGCTCCAGATCGCTGTGAGTGCATTTCCGGC
TACGTGTCAGCCAGAAATCACCAGGATGGCAGCCACTACTGTGAACCCAT
CTGCGAGACCCCATGTCCTGCGGGTGCTCAGTGCGTAACGCCCAATACAT
GTGCCTGTCGCGACGGGTACACCCAATTGCAGCCAACTGACGATGGTGTG
AGTGGTGGATGTGCCCCAGTTTGCCGGGTGGGCGATGGCTGTGCCAATGG
CAAGTGCATCGATGTGGACCGCTGTGCCTGCAACTCCGGATATCGGTGGG
ATAAGGCCGAAGAGAGGTGTATCGAGCTCAGTGCAGAGTCAATCTCTGAG
GAACTGGAGACCACCGAGGACAATACGGATTCGCCGAGCACCAGTTCAAC
AGCAGTATTCACGGCCACCCACTGTCCGGATGACTTTGTCCTGTTCCGCG
GCGAATGCCGCGAGAAGCAATTCGACAGCAATGATGTGGGTTGCCTTAAA
TCCGGCTGTGGTCCGCATCAAACATGCCTGGACTCCGGTGTATGTCAGTG
CTCCGATGGCTATGTGCCGGGAGGAGAGTGGCGAAGCAACTGGAGTGCTC
AGCTGTCGGCGCACTTTGCTCGACCAAATTCTCGGGCTGACGAGCTATCG
ACGATGACGATGAGCTGATCCCTGACATACCCATCATGGTGTGCCTGTGA
ATCTGTTGTTCTGCTCATGGTGGTCTCCTCGGTGTAGACGATATCGCCAG
GAGCGGGCTGCTTGGCAACAAGGAAATGGGAGTGCCAGTATCCGAAAA
UFO07092.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:55:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| NimC4-RA | 1282 | CG16876-RA | 50..1144 | 9..1091 | 5050 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:55:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 14047631..14048725 | 9..1091 | 4720 | 97.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:55:21 has no hits.
UFO07092.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:23:13 Download gff for
UFO07092.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| nimC4-RA | 48..1145 | 9..1094 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:28 Download gff for
UFO07092.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NimC4-RA | 50..1147 | 9..1094 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:41:37 Download gff for
UFO07092.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NimC4-RA | 50..1147 | 9..1094 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:41:37 Download gff for
UFO07092.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 14047631..14048728 | 9..1094 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:28 Download gff for
UFO07092.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 14047631..14048728 | 9..1094 | 98 | | Plus |
