UFO07103.5prime Sequence
1104 bp (1005 high quality bases) assembled on 2009-09-30
> UFO07103.5prime
CAGTCGACATGTCTGACGAAAAGAAGGGAGGTGAGACCGAGCACATCAAC
CTGAAGGTCCTCGGCCAGGACAACGCCGTCGTCCAGTTCAAGATCAAGAA
GCACACACCCTTGAGGAAGCTGATGAACGCCTACTGCGACCGTGCCGGAC
TCTCCATGCAGGTGGTGCGCTTCCGTTTCGACGGACAGCCCATCAACGAG
AACGACACTCCGACCTCGCTGGAGATGGAGGAGGGCGACACCATCGAGGT
TTACCAGCAGCAGACTGGTGGCGCTCCAGCAAGCTTTCTAGACCATTCGT
TTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAAT
CATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATT
CTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCA
GATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAG
CTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTA
ATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGA
ACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTT
GCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTA
AATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATA
TTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGC
CACATCTTGCGAATATATGTGTAGAAACTGCCGGAATCGTCGTGGTATTC
ACTCCAGAGCGATGAAACGTTTCAGTTTGCTCATGGAAACGTGTAACAAG
GGTGACACTATCCCATATCCCCAGCTCACCGTCTTTCATTGCCATACGAA
ATTCAGATGAGCATTCATCAGCGGTCAGAATGTGATAAGCCGATAAAACT
GTGCTTATTTTTTCTTTACGTCTTAAAGCGTATATCAGCTGACGGTCTGT
TTAGTACTGAGCCACTGACTGAATGCCTCATGTTCTACGATGCATGGATT
TCAC
UFO07103.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:40:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| smt3-RB | 689 | CG4494-RB | 167..438 | 7..278 | 1360 | 100 | Plus |
| smt3-RA | 743 | CG4494-RA | 221..492 | 7..278 | 1360 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:40:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6967031..6967302 | 278..7 | 1360 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:40:12 has no hits.
UFO07103.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:17:15 Download gff for
UFO07103.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| smt3-RA | 164..451 | 1..289 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:35:51 Download gff for
UFO07103.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| smt3-RA | 215..502 | 1..289 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:11:02 Download gff for
UFO07103.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| smt3-RA | 215..502 | 1..289 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:11:02 Download gff for
UFO07103.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6967031..6967306 | 1..278 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:35:51 Download gff for
UFO07103.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6967031..6967306 | 1..278 | 98 | | Minus |
