UFO07104.5prime Sequence
1103 bp (1024 high quality bases) assembled on 2009-09-30
> UFO07104.5prime
CAGTCGACATGAAATTCCTTATTGCCTTCGCCCTGTTCGCCTGCGTGGCC
GCCGATGTTAGCCACCTGAGCAACGAGTACCTGCCCCCCGTCCAGAGCTC
GTACGCCGCTCCCTCGGTGAGCTACTCCGCACCAGCCGTGCAGCAGACCT
ACGCCGCTCCAGCCATCCAGCAGTCGTATGTCGCCCCCAGCAACGAGTAC
CTGCCTCCTGTGCAGACCTACTCCGCACCGGCCGTCCAGAGGACCTACTC
CGCACCAGCTGTCCAGAGGACCTACTCCGCCCCCTCTGTTAGCTACTCGG
CACCCTCTGTGAGCTACTCGGCTCCATCGGTCAGCTACTCCGCTCCTGCT
GTCCAGCAGTCGTACTCCGCTCCATCGGTCAGCTACTCCGCCCCTGCTGT
CCAGCAGTCGTACTCCGCTCCATCGGTCAGCTACTCCGCCCCTGCTGTCC
AGCAGTCGTACTCCGCTCCTGCCGTCAGCTACTCCGCCCCATCGGTGAGC
TACTCTGCACCCTCCGTGGATGTGGGCACCCAGTACGCCTCCAACGGTGG
CTACGTCTACAGGAAGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGG
CCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAAC
TAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAA
AAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTG
AGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAA
TTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCA
TTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCC
AGCGGCATCAGCACCTTGTCGCCTTGCGTATATATTTGCCCATGGTGAAA
CGGGGCGAGAGTGTCCATATTGCCACGTTTAATCAAACTGTGAACTCACC
AGGATGCTGAACGAAACATATCTCAATAAACCCTTTAGATAGCAGTTCAC
GGTACACGCCAATCTGCATATTGGTAGACTGCCGATCGCTTGATTCATCG
ACA
UFO07104.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:01:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1368-RA | 774 | CG1368-RA | 72..629 | 9..566 | 2790 | 100 | Plus |
| CG1368-RA | 774 | CG1368-RA | 378..505 | 363..490 | 565 | 96.1 | Plus |
| CG1368-RA | 774 | CG1368-RA | 426..553 | 315..442 | 565 | 96.1 | Plus |
| CG1368-RA | 774 | CG1368-RA | 308..457 | 335..490 | 370 | 84.1 | Plus |
| CG1368-RA | 774 | CG1368-RA | 398..553 | 245..394 | 370 | 84.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:01:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 14174970..14175525 | 11..566 | 2780 | 100 | Plus |
| X | 23542271 | X | 14175274..14175401 | 363..490 | 565 | 96.1 | Plus |
| X | 23542271 | X | 14175322..14175449 | 315..442 | 565 | 96.1 | Plus |
| X | 23542271 | X | 14175274..14175353 | 411..490 | 325 | 93.8 | Plus |
| X | 23542271 | X | 14175370..14175449 | 315..394 | 325 | 93.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:01:56 has no hits.
UFO07104.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:17:14 Download gff for
UFO07104.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1368-RA | 58..624 | 1..566 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:10:06 Download gff for
UFO07104.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1368-RA | 63..629 | 1..566 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:33:20 Download gff for
UFO07104.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1368-RA | 63..629 | 1..566 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:33:20 Download gff for
UFO07104.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 14174961..14175525 | 1..566 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:10:06 Download gff for
UFO07104.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14068994..14069558 | 1..566 | 99 | == | Plus |
