UFO07105.5prime Sequence
1124 bp (1023 high quality bases) assembled on 2009-09-30
> UFO07105.5prime
CAGTCGACATGACATCCACCGAGCTGAAAATCGGCCTGACCACCAGTGCC
CGTCCCTCCAGCCGAGTGCTGAAGCCCCCAGGCGGCGGACACACCAATAT
CTTCTCGGAGCCCGACGTGGCCGTTCCCGCCCCGCGTGCCAAGTACAACC
AACAGAACTCCTCAAACCTCAATGCCTGCATGGGCTCCACGGATCCCAAC
AAGGTGGTGGAGAAAATTCGCGAAGAGGTCTCCATCCAGAAGGAGGAGGC
CAAGTCCGCCCCACCCAGCCAGCCCAAGGAGCCGGCGAACAAACCAGCGG
CCACAAATGGAGAGGCACGCGGCCGAGTTCCACCCGGCGGATTCTCGTCG
GGCGGATTCTGGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCA
GGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGC
CTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAAC
GCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGT
CATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTAC
GCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCT
GCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCG
GCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACG
GGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAA
ACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTT
TAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAATAT
ATGTGTAGAACTGCCGGAATCGTCGTGTATTCACTCCAGAGCGATGAAAA
CGTTTCAGTTTGCTCATGGAAACGGTGTAACAGGTGACACTATCCATATC
ACCAGCTCACGTCTTCATGCATACGAAGTCCGGATGACATTCATCAGCGG
GCAGATGGTGATAAGGCCGATAAACTTGGTGCTTATTTCTACGACTTAAA
GCCGTAATCAGCTGAACGCTGTTA
UFO07105.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:54:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1943-RD | 1207 | CG1943-RD | 145..498 | 9..362 | 1770 | 100 | Plus |
| CG1943-RC | 985 | CG1943-RC | 113..466 | 9..362 | 1770 | 100 | Plus |
| CG1943-RB | 991 | CG1943-RB | 119..472 | 9..362 | 1770 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:54:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 7076919..7077272 | 9..362 | 1770 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:54:10 has no hits.
UFO07105.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:17:13 Download gff for
UFO07105.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1943-RA | 157..520 | 1..362 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:11:25 Download gff for
UFO07105.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1943-RB | 109..472 | 1..362 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:29:10 Download gff for
UFO07105.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1943-RB | 109..472 | 1..362 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:29:10 Download gff for
UFO07105.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 7076909..7077272 | 1..362 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:11:25 Download gff for
UFO07105.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2902631..2902994 | 1..362 | 98 | == | Plus |
