UFO07106.5prime Sequence
1104 bp (968 high quality bases) assembled on 2009-09-30
> UFO07106.5prime
CAGTCGACATGAAGTTACTTGAAAGTTCACGTTTTGAGGCTATCAACAAC
GCTCTTTCTATACAAACAAGTGGCATCACGATTTTTGGACGGATAGAAAG
TTACTCATGCAAAATGGTTGCGGCCGAGAAAGTATTGTATAAACGATTTA
CAGCAGATTCTCATGGGCATGACCTTCAGGCGTTATCACCTCCACAAACT
TTGGCTGACTTTTCACCAAACTTTCGTCGAAACAACAGTCAATCTGGAGA
TGAAGGCATTACTCTTTGCGATACCATTTCCAGAAAAACATTATTTTATT
TAATTGCTACTTTAAATGCGTCTTTTGAACCAAACTACGATTTTTCTGAA
GCAAAGTCCCATGAATTTAGCAAAGAGCCGTCATTGCAGTGGGTTATGAA
CTCAATCCATGCAAATTTATCGGCATTAGCGGGAGATCAGTATCAAGCTA
TACGTCAACCATTATGGTCTGCAGTTGACGACGAAGTGATCCTATCAGAG
TGTGACATATACAGTTATAATCCAGATCTAAGTTGCGATCCTTTTGGCGA
ACCAGGCTGCTTGTGGTCATTTAATTATTTCTTTTATAATAAGAAATTAA
AACGAATTGTTTTTTTTACAAGTCGAGCAGTGAATTCTCTTTACGCCGGT
GAAACCTTACCCTTTTCGATGGAAGAAGAAGTGTACGCAAGCTTTCTAGA
CCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATA
ATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTG
CTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAA
CAAATCCAGATGGAGTTCTGAGGTCATTACTGGGATCTATCAACAGGAGT
CCAAGCGAGCTCGATATCAAATTACGCCCGCCTGCCACTCATCGCAGTAC
TGTGTAATCATAAGCATTCTGCGACATGGAGCATCACAACGGCATGATGA
GCTGATCGCCAGCGCATCAGCACTGTCGCTTGCGTATATATTGCGCATGG
GAAACTGGGGCTAGAGTTGTCATATGTCAGTGAATCAACTGGGGACTCCC
AGAT
UFO07106.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:39:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Maf1-RE | 1078 | CG40196-RE | 210..888 | 8..686 | 3365 | 99.7 | Plus |
Maf1-RD | 1102 | CG40196-RD | 307..985 | 8..686 | 3365 | 99.7 | Plus |
Maf1-RB | 1358 | CG40196-RB | 490..1168 | 8..686 | 3365 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:39:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 1515890..1516171 | 634..353 | 1395 | 99.6 | Minus |
2R | 25286936 | 2R | 1516222..1516469 | 356..109 | 1225 | 99.6 | Minus |
2R | 25286936 | 2R | 1516520..1516621 | 109..8 | 510 | 100 | Minus |
2R | 25286936 | 2R | 1515785..1515836 | 686..635 | 260 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:39:57 has no hits.
UFO07106.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:17:12 Download gff for
UFO07106.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG40196-RB | 252..930 | 8..686 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:35:46 Download gff for
UFO07106.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Maf1-RC | 472..1150 | 8..686 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:10:50 Download gff for
UFO07106.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Maf1-RB | 490..1168 | 8..686 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:10:50 Download gff for
UFO07106.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 1516520..1516621 | 8..109 | 100 | | Minus |
2R | 1515785..1515836 | 635..686 | 100 | <- | Minus |
2R | 1515890..1516167 | 357..634 | 99 | <- | Minus |
2R | 1516222..1516468 | 110..356 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:35:46 Download gff for
UFO07106.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ArmU | 1092214..1092491 | 357..634 | 99 | <- | Minus |
ArmU | 1092109..1092160 | 635..686 | 100 | <- | Minus |
ArmU | 1092546..1092792 | 110..356 | 99 | <- | Minus |
ArmU | 1092844..1092945 | 8..109 | 100 | | Minus |