UFO07120.5prime Sequence
1153 bp (1014 high quality bases) assembled on 2009-09-30
> UFO07120.5prime
CAGTCGACATGGTCACATACAATACTCTAATACAGAACGAAAAGAATGAA
AATGTGGTCGCCCCGATAAGCCGGCCATTCGCCAGAAAGAGGAGGACTGA
GATTCGCCGCCTGCAGTCCAACAGGCGGTTGAATAAAAAGGTGTGCAAAC
ACCATTTGGACATTGCCCATTGTACCCAGAAGAAGGCTCCATGGCGGAAT
TGGGCATACCTCATTCTCGCCCTCGCCGCAGGAATTGGCATGTTATTGCA
GTTCACCGACAAGTTGTCCACGGTCAGCGGATTCCTGGAAAGCTACAAAA
ACCAGTACCACTCGATCGTCCACAACCAGGACAACTACTGCAATCCCTCC
CGACGGCTGGGCGACATGGTCCTGCACGCCCGCCACCAGGTACTCAACCA
GGATCTTGCATTGAACCAGCTAGAACTGGCACTGGACAACACCACCAATG
AGGCAATCGTCTTGGTGGGCACCTCTGGCGTAGGCAAGAGCCACACTGCG
CGAATCTTGCGCGAAACGTTTCCCTGGCCCGAGAACGTGAATACACTCTC
CTGGACCGGCAGTTCTTCTTTGGGCCGAGTGAAGAGCATGCTATCCGGCC
TGACATATTGCGGACAGAATATGATCTTGATTGATAACATGACGCCGAAG
GATGCACACTTCGTGCCTATCATTAACGAAATGATAAGTGAGGGCGAAAA
GAGCGCCAACCACACTGAGCATCCGGCAAGCTTTCTAGACCATTCGTTTG
GCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCAT
AATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTC
ACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGAT
GGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTC
GATATCAAATTACGCCCGCCCTGCACTCATCGCAGTACTGTTGTATTCAT
AGCATTCTGCGACATGCAGCATCACAAACGCATGATGACTGATCGCAGCG
CATCAGCACTGTCGCTGGTATAATATTGGCATGTGAACGGGGAGAGTTGC
ATTGCCAGTAATCGACTGGTACTCACCCAGATGGCCTGAACGAAAACATT
TTC
UFO07120.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:50:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4880-RA | 1700 | CG4880-RA | 150..866 | 9..725 | 3585 | 100 | Plus |
| CG4880-RB | 1505 | CG4880-RB | 150..531 | 9..390 | 1910 | 100 | Plus |
| CG4880-RB | 1505 | CG4880-RB | 529..803 | 451..725 | 1375 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:50:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16886967..16887411 | 9..453 | 2225 | 100 | Plus |
| X | 23542271 | X | 16887621..16887895 | 451..725 | 1375 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:50:57 has no hits.
UFO07120.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:23:08 Download gff for
UFO07120.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4880-RA | 138..857 | 9..729 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:15:58 Download gff for
UFO07120.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4880-RA | 150..869 | 9..729 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:40:45 Download gff for
UFO07120.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4880-RA | 150..869 | 9..729 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:40:45 Download gff for
UFO07120.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16887623..16887898 | 453..729 | 99 | == | Plus |
| X | 16886967..16887410 | 9..452 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:15:58 Download gff for
UFO07120.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16781000..16781443 | 9..452 | 100 | -> | Plus |
| arm_X | 16781656..16781931 | 453..729 | 99 | == | Plus |
