UFO07121.5prime Sequence
853 bp (29 high quality bases) assembled on 2009-09-30
> UFO07121.5prime
CAATCCACATGTTCAGGCTAGTTTTTAAGGGTTACAGGTGCAAAAGTACC
AGTCCTGATTTAACGGAAGTTGTTAAGATCGATGATTGGGTACCCCGGGG
GAATGATCAAAAAAAGAGTGATGATAATATTGTTCAACGATTACTATCAG
CAATGTAGAAAGCCTACAGACAATGCCAGGCGTTAAATCGCCAAAAGATT
GGCGAACCTATACATTAACTAACCATCCCGGCATTATTGTGATTCGGAAT
CCTTTCTCGGAACGAGGCCGGCGTTATTGGAGCGCCCGATGTCTGCGGGA
TTTTCCGCGAACGCCAAATATAGTCGATTTAAATGAAAGGCTCTTCGATG
AATCCGTCAGGTCGGACTGGTGGAAACAGCTTAATCTGTGCAGCGATGGC
GTTGAGTTCCAACGTATAAAATCCGCGATGCGTTGGACGACATTTGGATA
TCATCACAACTGGGACACGAAGATCTATGATGAGGAGATGCAGTCGCCGT
TTCCCGAATATTTGAACATGCTATGCGGATTGTTTGCGCAAGCGGTGGGA
TACGCGGATTTTAAGCCACAAGCCGCAATTGTAAATGACTATCAAGTTGG
TGATACGTTATCGGGTCACACAGATCACTCTGAACCAGACGAGTCGGCCC
CTTTGTTTTCTGTTAGTTTTGGTCATACTGCAATATTTCAAATTGGTGGA
AGATCTTTAGAAGAAAAGCCGACCGCTATCTACCTTCAATCCGGGGGACG
TTATGATAATGTCCGGAGAATCGCGTCTATGCTATCGCGCACTTCCTCGT
ATCATCAAACTCACGCTTCCCCGACTTATCACTGAAATGGAGATGTCGAT
ATG
UFO07121.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:33:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| AlkB-RA | 1133 | CG33250-RA | 70..917 | 8..851 | 3540 | 94.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:33:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15858600..15859141 | 666..126 | 2405 | 96.7 | Minus |
| X | 23542271 | X | 15858377..15858539 | 827..665 | 615 | 94.5 | Minus |
| X | 23542271 | X | 15859196..15859310 | 122..8 | 410 | 90.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:33:49 has no hits.
UFO07121.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:23:08 Download gff for
UFO07121.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| AlkB-RA | 172..1028 | 3..853 | 94 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:49:08 Download gff for
UFO07121.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| AlkB-RA | 64..920 | 3..853 | 94 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:10:45 Download gff for
UFO07121.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| AlkB-RA | 64..920 | 3..853 | 94 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:10:45 Download gff for
UFO07121.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15858347..15858537 | 667..853 | 92 | <- | Minus |
| X | 15858600..15859141 | 126..666 | 96 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:49:08 Download gff for
UFO07121.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15752380..15752570 | 667..853 | 92 | <- | Minus |
| arm_X | 15752633..15753174 | 126..666 | 96 | <- | Minus |
