Clone UFO07129 Report

Search the DGRC for UFO07129

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:71
Well:29
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO07129.5prime Sequence

1088 bp (985 high quality bases) assembled on 2009-09-30

> UFO07129.5prime
CAGTCGACATGTTTGCACACGCAATTTGGCTTCGCCTTGCTCCTTCCTCG
ACAAAGACCCGGGGACCAGGACGAGGACCTGGACCTGGAGCTGGACTAGG
ACTTAAAACTGGAACTGGAACTGGACGTGGTCCTGAGGTGTGGCCGAGAG
TGAAAGAGGGCCAGGGCCAGGGATTATCACCAGCAGCAATAGACCGAGTC
GAACAGATCGAAAAACAACAGAAAAAGTCCGCAGCAAGCTTTCTAGACCA
TTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATC
ATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTT
GGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAA
ATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAA
GCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTG
TTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCAT
GATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAA
TATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCAC
GTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAA
ACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAA
CACGCCACATCTTGCGAATATATGTGTAGAAACTGCCGGAAATCGTCGTG
ATATTCACTCCAGAGCGATGAAAACGTTTCAGTTTGCTCATGGAAAACGG
TGTGACAAGGTGAACACTATCCCATATCACCAGCTCACCGTCTTTCATTG
CCATACGAAATTCCGGATGAGCATTCATCAGCGGGCAGATGTGAATAACG
CCGATAAACTTGTGCTTATTTTTCTTACGTCTTAAAAGCGTATATCCAGC
TGACGTCTGATTATAGTACATGAGCACTGACTGAATGCTCAATGTCTACG
ATGCAATGGGAATATCACGTGCCATATCAAGGATTTTC

UFO07129.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 19:50:13 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:50:10
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 6607285..6607509 233..9 1125 100 Minus
Blast to na_te.dros performed on 2014-11-28 19:50:11 has no hits.

UFO07129.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:23:04 Download gff for UFO07129.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15234-RA 1314..1553 1..239 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:30:41 Download gff for UFO07129.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 6607285..6607514 1..233 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:30:41 Download gff for UFO07129.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 6607285..6607514 1..233 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:52:23 Download gff for UFO07129.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 2494790..2495019 1..233 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:52:23 Download gff for UFO07129.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 2494790..2495019 1..233 98   Minus