UFO07133.5prime Sequence
1137 bp (1013 high quality bases) assembled on 2009-09-30
> UFO07133.5prime
CAGTCGACATGGCTGAGGGTAATACCGCTGGCGGAGAGGACCAAAAGCTG
ACGGACATCTTTCTAAAGGGCTGGAACATATTCGACGAGCTAGAAGTTAC
CGAACTGCCCTTCAATGGCAGCGAATTTCAGAACAAAGTGAAGACTGCAA
TGGGCCTTTTCGAGCAGGCCACCGTCATTGTGAACCAGGTTAGCATGTTC
AGTGCCAACGAGTTGATCGACGAGGTGTCCACGGAATCGCTACCATTCAT
GCTGCTCCCTTACTTTCTGGGCAAGCTTACCACTAAGATCAACAGCCCCA
ATAACACACACTCCATAGAGCTGGGCGAGATTTACTTCAAGGACCACCTG
CAGCGTTGCCAGGAGTATGATCTCTGTGCAGCGCCCAAATCTCAGGTGGC
TAAGGCGGATAGCCAAGCGGAAAAAAGCGAGCAGCGCGAGCTGGTAGAGG
CAGCCTTCAATAGAAACGACAAAATAGCCCAGTATCGCCGGATGAAGGAG
ATTGACGAGTATATGGCCAGAATGCGCGATGCAGTCAAGAACAAAACGGT
CGACGATGAGGATAAACGTGTCTTTTTCCTCAAGTATTTGGACAAGAGTA
TAATAGACTCCAAGCAGGAATTAGAAACATTGGGCGTAATGAAGCAGCTG
GCCCAGATGCGCCTTGCCCGATTGGCTGGTGGCGAATCCGACAACGAAGT
GGATTCGTTCCGTCCACCGAATCAAAATCAATCTTCTGCATCGTCCACCT
CCCGCGGTCATGGTCACAGCCACGGACCCGGACACCACCACCATCATCAG
CAGGCCGCTAAGCCAAAGCCCTTGCAGCCCTTCATCATAACACGTAATGC
CACCCAGAAAGCGGTTTTCGGCTTGGGATACCCCAGTTTGCCCATTATGA
CTGTTGATGAATTCTACCAGCAGCGCGTCGACGAGGGCATCTTTCCTGAT
GAGGAGAGTTGCAAGATGATCAGCACAGCATCGCGGCCGCCCGGGATCCA
CGAAAAGAGACGAGAGAGCGTGAGGAGCTACAGGCGGAGCAGGATGATCC
GAGTATATAGACGCATGAGCCATGGATGAATCAAGATGTGGTGCGTCCGG
GTACGCACGTCTACCGTAATGCCAGCTTCCTAGAACA
UFO07133.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tap42-RA | 1335 | CG31852-RA | 108..1218 | 9..1097 | 5030 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13367915..13368742 | 130..957 | 4125 | 99.9 | Plus |
| 2L | 23513712 | 2L | 13367724..13367846 | 9..131 | 615 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:29:51 has no hits.
UFO07133.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:23:00 Download gff for
UFO07133.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tap42-RA | 109..1228 | 9..1105 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:44:08 Download gff for
UFO07133.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tap42-RA | 108..1227 | 9..1105 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:03:29 Download gff for
UFO07133.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tap42-RA | 108..1227 | 9..1105 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:03:29 Download gff for
UFO07133.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13367724..13367846 | 9..131 | 100 | -> | Plus |
| 2L | 13367917..13368913 | 132..1105 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:44:08 Download gff for
UFO07133.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13367724..13367846 | 9..131 | 100 | -> | Plus |
| arm_2L | 13367917..13368913 | 132..1105 | 97 | | Plus |
