UFO07137.5prime Sequence
1119 bp (997 high quality bases) assembled on 2009-09-30
> UFO07137.5prime
CAGTCGACATGCCCGTTGATCCCATGGATGACATCGAACTGCGCTCCGTG
CAGCTGCAATTCCCCAATGCCCGCGGCTCCATCCTGGAGGCCTGCGAACA
GCGACGCGTGCCCACAGACAAGGGCGATGTCCACGTGGCCATACAGGGCG
ATACGGCCAAGCCGGCCATTATCACCTACCACGATTTGGGCCTCAACTAC
GCCACCAGCTTTGCTGGCTTCTTCAATTTTCCAGTGATGCGAGGTCTGCT
GGAGAACTTCTGTGTTTACCACGTGACTGCTCCTGGCCAGGAGGAGGGTG
CACCCACTTTGCCAGAGGATTACGTCTATCCGACCATGGATGATCTGGCC
GCCCAGCTGCTTTTCGTGCTATCCCACTTTGGCCTAAAGTCGGTGATTGG
TTTCGGCGTTGGTGCCGGGGCGAATATTCTGGCCCGTTTCGCTCACGCCC
ATCCGGACAAGGTGGGCGCCCTGTGCCTGATCAATTGCGTGTCCACGCAG
TCGGGCTGGATCGAGTGGGGCTACCAGAGCTTCAATGCCCGCTTCTTGCG
CACCAAGGGCATGACACAGGGCGTGATCGATTATCTGATGTGGCACCACT
TCGGACGCAATCCGGAGGAGCGCAATCACGACCTGGTGCAGATGTACAAG
CAGCACTTCGAGCGTGGCGTTAATCCGACCAATCTTGCCATGCTGATCAA
CGCGTACATCCATCGTAACGACCTGCATCTGGCACGCACTCCGCCAGGTA
CTCCGGGCAGCGAAACGGCGGCCACCACGCTGAAGATGCCGGTGATCAAT
ATCACAGGTTCGCTCTCGCCGCACGTCGACGACACGGTGACCTTCAATGG
GCCGTCTAGATCCTACAAACTCATCGTGGATGAAGATTTCCGATTGCGCT
TTGGTGCTGGAGGAGCAGCCGGCTAAGCTGGGCCGAGGCTTTCCTGCTCT
TCTTGCAGGCGAGGGCTACGCAACGCGCTGTCACGCAGCGAGTTCGCCTG
TGACTAATACCACACTACTCTCATTCTTCTTTGCACTTCAGAACACACAG
CAGCCATGAGACGCGAATCGTGACCGGTAGAACGGATCGCCATCGCACTG
AACCTCGGTGCCATCGCCT
UFO07137.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:50:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MESK2-RI | 2798 | CG15669-RI | 483..1517 | 8..1034 | 4835 | 98.5 | Plus |
| MESK2-RJ | 2702 | CG15669-RJ | 387..1421 | 8..1034 | 4835 | 98.5 | Plus |
| MESK2-RE | 2619 | CG15669-RE | 872..1834 | 8..971 | 4720 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:50:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21511404..21511968 | 320..885 | 2780 | 99.8 | Plus |
| 2R | 25286936 | 2R | 21510870..21511060 | 8..198 | 955 | 100 | Plus |
| 2R | 25286936 | 2R | 21511123..21511243 | 199..319 | 605 | 100 | Plus |
| 2R | 25286936 | 2R | 21512091..21512177 | 884..970 | 310 | 95.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:50:50 has no hits.
UFO07137.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:15:53 Download gff for
UFO07137.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MESK2-RJ | 381..1406 | 1..1020 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:40:42 Download gff for
UFO07137.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MESK2-RJ | 381..1406 | 1..1020 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:40:42 Download gff for
UFO07137.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21510861..21511060 | 1..198 | 98 | -> | Plus |
| 2R | 21511123..21511243 | 199..319 | 100 | -> | Plus |
| 2R | 21511404..21511968 | 320..885 | 99 | -> | Plus |
| 2R | 21512093..21512177 | 886..970 | 95 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:15:53 Download gff for
UFO07137.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17398366..17398565 | 1..198 | 98 | -> | Plus |
| arm_2R | 17398628..17398748 | 199..319 | 100 | -> | Plus |
| arm_2R | 17398909..17399473 | 320..885 | 99 | -> | Plus |
| arm_2R | 17399598..17399682 | 886..970 | 95 | -> | Plus |
