UFO07141.5prime Sequence
1078 bp (1052 high quality bases) assembled on 2009-09-30
> UFO07141.5prime
CAGTCGACATGAAGTTCTTCCAAGCCGCCGCCCTTCTCTTGGCCATGTTC
GCTGCCCTCGCCAACGCCGAGCCCGTTCCCCAACCTGGAACCGTGCTCAT
CCAGACCGACAACACCCAGTACATTCGTACTGGTGCAAGCTTTCTAGACC
ATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAAT
CATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCT
TGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACA
AATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCA
AGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACT
GTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCA
TGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATA
ATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCA
CGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAA
AACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTA
ACACGCCACATCTTGCGAATATATGTGTAGAAACTGCCGGAAATCGTCGT
GGTATTCACTCCAGAGCGATGAAAACGTTTCAGTTTGCTCATGGAAAACG
GTGTAACAAGGGTGAACACTATCCCATATCACCAGCTCACCGTCTTTCAT
TGCCATACGAAATTCCGGATGAGCATTCATCAGCGGGCAAGAATGTGAAT
AAAGGCCGGATAAAACTTGTGCTTATTTTTTCTTTACGGTCTTTAAAAAG
GCCGTATATCCAGCTGAACGGTCTGGTTATAGGTACATTGAGCAACTGAC
TGAAATGCCTCAAAATGTTCTTTACGATGCCATTGGGATATATCACGGTG
GTATATCCAGTGATTTTTTCTCAATTTTAGCTCGTAGCTCTGAAGAATCC
ATACTCGTTAGCATAATAAACGAGTTAT
UFO07141.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:56:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| IM4-RB | 767 | CG15231-RB | 63..190 | 7..134 | 640 | 100 | Plus |
| IM4-RA | 418 | CG15231-RA | 63..190 | 7..134 | 640 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:56:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 20869182..20869259 | 84..7 | 390 | 100 | Minus |
| 2R | 25286936 | 2R | 20869073..20869122 | 134..85 | 250 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 19:56:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| transib1 | 2167 | transib1 TRANSIB1 2167bp | 232..299 | 703..770 | 123 | 68.1 | Plus |
UFO07141.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:22:55 Download gff for
UFO07141.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IM4-RA | 57..197 | 1..142 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:56:01 Download gff for
UFO07141.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IM4-RA | 57..197 | 1..142 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:33:22 Download gff for
UFO07141.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IM4-RA | 57..197 | 1..142 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:33:22 Download gff for
UFO07141.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 20869073..20869122 | 85..134 | 100 | <- | Minus |
| 2R | 20869182..20869263 | 1..84 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:56:01 Download gff for
UFO07141.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16756578..16756627 | 85..134 | 100 | <- | Minus |
| arm_2R | 16756687..16756768 | 1..84 | 96 | | Minus |
