UFO07142.5prime Sequence
1118 bp (1023 high quality bases) assembled on 2009-09-30
> UFO07142.5prime
CAGTCGACATGGCATCCCCAGTAGTCAGCCTGCTTCTCGTCGGGATCTGC
GCCCTGGCCTTTGTCCATGTGGCTCGGTCGGAATGCTGCACCTCCCGGGA
GCTGGTGGAATTCAAGATGGACAGAGGCGACTGCGAGGCTGTGCGTGCAA
TCGAAAACTATCCCAACGGCTGCGAAGTGACGATCTGCGCCGATGGTGTT
GCCCAGTTGGGCGCCTACTGCGGCCAGGGATCGTGCAACATCTTCGGCTG
CAACTGCGACGGCGGCTGTCTGAGCGGCGATTGGTCACAGGAATTTGTGA
GGAGGAACCAGCAGTACGGAATCCAGATCATCAAAGTCACCAGGCTGCCA
TTTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGG
TCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGAT
CCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGG
CAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGG
ATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCC
TGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATG
GAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCA
CCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAG
AAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCA
GGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAAT
AGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAATATATGTGTAGA
AACTGCCGGAAATCGTCGTGTATTCACTCCAGAGCGATGAAAACGTTTCA
GTTTGCTCATGGAAACGGTGTAACACGGTGACACTATCCCATATCACCAG
CTCACCGTCTTTCATGCATACGAAATAGATGAGCATTCATCAGCGGCAGG
ATGTGATAAGCGAATAAACTTGGCCTATTTTCTTACGTCTTAAAAGGCCG
TAATTCAGCTGAACGCTG
UFO07142.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:00:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Diedel-RA | 416 | CG11501-RA | 27..372 | 8..353 | 1730 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:00:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29493878..29494223 | 8..353 | 1730 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:00:50 has no hits.
UFO07142.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:22:55 Download gff for
UFO07142.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11501-RA | 23..375 | 1..357 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:09:24 Download gff for
UFO07142.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Diedel-RA | 23..375 | 1..357 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:32:42 Download gff for
UFO07142.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Diedel-RA | 23..375 | 1..357 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:32:42 Download gff for
UFO07142.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29493874..29494223 | 1..353 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:09:24 Download gff for
UFO07142.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25319596..25319945 | 1..353 | 98 | == | Plus |
