UFO07143.5prime Sequence
1110 bp (994 high quality bases) assembled on 2009-09-30
> UFO07143.5prime
CAGTCGACATGAAGTTCCTGGCTATCTGCATTTTTCTAATCTTCGCCCTG
GTGGCCGTTCAGGCACATCCTGGTGGATTCGGCGGATTCGGTGGAGGCGG
TGGTGGCGGTGGTCGCGGTGGAGGCGGTGGAGGCGGTGGAGTCGGTGGAG
TCGGCGGTTCGAACGCAGTTGCCAACGCGAATGCCGCTGCAACCGCCGAC
AGCAGAGGAGGCGGCCCAGCTTCCGCCTCGGCCTCGGCCACTGCAACCGC
CAACGCCAGCTCCGGAGGAGGTGGAGGTGGACATGGCAGACATGGAGCAA
GCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAAT
CATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTC
ATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGA
GCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATC
AACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACT
CATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCA
TCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTC
GCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGT
CCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTG
GCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAG
GTTTTCACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACTGCC
GGAAATCGTCGTGGTATTCACTCAGAGCGATGAAAACGTTTCAGTTTGCT
CATGGAAAACGGTGTAACAGGGTGAACACTATCCCATATCACCAGCTCAC
GTCTTTCATGCATACGAAATTCCGATGAGCATCATCAGGCGGGCAGATGT
GATAAGGCGATAAACTGTGCTTATTTTCTTACGGTCTTAACGCGTATTCA
GCTGACGCTGTAAAGTACTTGACACTGACTGAATGCCAGGTCTACAGCAT
GGATATCACG
UFO07143.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:00:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17107-RC | 563 | CG17107-RC | 26..313 | 9..296 | 1440 | 100 | Plus |
| CG17107-RB | 482 | CG17107-RB | 90..377 | 9..296 | 1440 | 100 | Plus |
| CG17107-RA | 418 | CG17107-RA | 26..313 | 9..296 | 1440 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:00:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10681991..10682278 | 9..296 | 1440 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 23:00:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| transib1 | 2167 | transib1 TRANSIB1 2167bp | 232..289 | 865..921 | 143 | 74.1 | Plus |
UFO07143.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:22:54 Download gff for
UFO07143.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17107-RA | 19..312 | 9..303 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:09:19 Download gff for
UFO07143.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17107-RA | 26..319 | 9..303 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:32:39 Download gff for
UFO07143.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17107-RA | 26..319 | 9..303 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 23:32:39 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-05 01:09:19 has no hits.
