UFO07147.5prime Sequence
722 bp (49 high quality bases) assembled on 2009-09-30
> UFO07147.5prime
CAATCCACATGTCCTTTCTTTCGCCCACACTGCGCCTGGAGAATCTGTCC
ACCCAGCCCACGATGACTCAGGATCATGTGCCCGAGGACCATCGCTATAA
CTAACACAATATTGTGGCTCATTGGTGTGTGCCCATCAATGGCAAGATGT
ACCGCGTCTACCTGGAACATGGCACACCCATTGGGCGGCTTTTGATTTGG
GTCATTGGACGGGAAGTCCTGCATCGCGACTGGATGTTCAAACTGGTTGG
CGAATACCCCTTTCACATCCATCATACCCGCTGCGTCATACCCGTTGATC
CTGCGCCGGGCTTCAAATACGAGTACTCCCTCTACATCGACGGCAAATCG
CACGACCAGTACACCGAGGACATGACACGGCAATATCTACTGTGGCTATA
TGCGGATGATGCGGCCGCCGATGCGCCGCAGGAATATAGAATAATGCTCA
AACTGGACACGCTGAGTCTCTACGTAAACAATGACCTGCGCACCGAGGAG
TCGGTTTTTGTTCACGGCGGGCCATACACCGAGTTCCTGCTGCAGGACAC
GGAATTCGTGCTTCATGCACGCTCAAATGGCAATAAACATGATGGCATCG
TTCACTTTCTGCTGGCGAATGGGGTGGCAGTTCCGGATGCTAAGATTCAT
GATATTATGCAAGAGCCGGTCTCCATTTTGCAGAGCAGCAACACAAGCTT
TCTGACCATTCGTTTGGCGCGC
UFO07147.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:55:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10257-RA | 1377 | CG10257-RA | 554..1238 | 8..692 | 2840 | 94.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:55:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14943770..14944058 | 212..500 | 1265 | 95.8 | Plus |
| 2R | 25286936 | 2R | 14944137..14944330 | 499..692 | 790 | 93.8 | Plus |
| 2R | 25286936 | 2R | 14942951..14943089 | 8..146 | 605 | 95.7 | Plus |
| 2R | 25286936 | 2R | 14943197..14943265 | 145..213 | 210 | 87 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:55:15 has no hits.
UFO07147.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:22:59 Download gff for
UFO07147.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10257-RA | 335..1025 | 1..692 | 93 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:24 Download gff for
UFO07147.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10257-RA | 548..1238 | 1..692 | 93 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:41:33 Download gff for
UFO07147.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10257-RA | 548..1238 | 1..692 | 93 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:41:33 Download gff for
UFO07147.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14942945..14943089 | 1..146 | 93 | -> | Plus |
| 2R | 14943199..14943264 | 147..212 | 86 | -> | Plus |
| 2R | 14944139..14944330 | 501..692 | 93 | | Plus |
| 2R | 14943771..14944058 | 213..500 | 95 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:24 Download gff for
UFO07147.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10830450..10830594 | 1..146 | 93 | -> | Plus |
| arm_2R | 10830704..10830769 | 147..212 | 86 | -> | Plus |
| arm_2R | 10831276..10831563 | 213..500 | 95 | -> | Plus |
| arm_2R | 10831644..10831835 | 501..692 | 93 | | Plus |
