UFO07148.5prime Sequence
1095 bp (979 high quality bases) assembled on 2009-09-30
> UFO07148.5prime
CAGTCGACATGTCGCAATCCGATAACGTGGCACGTGAGCAAACTGCGGCA
AATGCAGGGCCGGATGCATGTCAAGGATGCCGCGGCCAATTGCCAAATGC
CACGCCCGTGGAAGTCGAGGACATGGCCTTGCCGTCGATGGAGCGTCTCA
TTCGAAAGGCCAACATGGCCCAGAAAATGCTGAACGATGTGATGAAACAG
ATCCAGAAGCAGCAGCAGCAGGAATCTCAACTCTCCATCAAGGAGACCAA
GTCCAAGCACCGCAGCTCCGATGGAGTTCCAGTTCCGACCACAGTGACTG
CGAGCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGT
GGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAG
ATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGC
GGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACT
GGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGC
CCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACA
TGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAG
CACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGA
AGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACC
CAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAA
ATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAATATATGTGTA
GAAACTGCCCGGAAATCGTCGTGTATTCACTCCAGAGCGATGAAAACGTT
TCAGTTTGCTCATGGAAAACGGTGTAACAAGGTGAACACTATCCCATATC
ACCAGCTCACGTCTTTCATGCATACGAAATCAGATGAGCATCATCAGCGC
AGATGTGATTACGCGATAAACTGTGCTTATTTTCTTACGGTCTTAAAAGC
CGTATTCAGCTGACGGTCTGATTAAGTACTGACACTGACTGAATG
UFO07148.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:01:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8620-RA | 712 | CG8620-RA | 149..445 | 9..305 | 1485 | 100 | Plus |
| CG8620-RB | 775 | CG8620-RB | 148..415 | 9..276 | 1340 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:00:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7158247..7158514 | 9..276 | 1340 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:01:00 has no hits.
UFO07148.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:22:59 Download gff for
UFO07148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8620-RA | 140..452 | 2..312 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:09:30 Download gff for
UFO07148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8620-RA | 140..452 | 2..312 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:32:49 Download gff for
UFO07148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8620-RA | 140..452 | 2..312 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:32:49 Download gff for
UFO07148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7158238..7158514 | 2..276 | 98 | -> | Plus |
| 3L | 7158579..7158607 | 277..305 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:09:30 Download gff for
UFO07148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7151338..7151614 | 2..276 | 98 | -> | Plus |
| arm_3L | 7151679..7151707 | 277..305 | 100 | == | Plus |
