UFO07149.5prime Sequence
1096 bp (998 high quality bases) assembled on 2009-09-30
> UFO07149.5prime
CAGTCGACATGCGCCAGCTGAAGGGAAAGGTGAAGGAGACGCGCAAACAG
AAGAAGGAGCGCAAGCTGGACAACCTGGAGACCCAGGCGAAGATCCGCAC
CGTGGTGCTGCCGGCGCTCGGCGTTTTGGCGGTCTTTCTGGTGCTGTTCG
TCTACTTGAAGACCCGCCCCGCGGTCTTGGCCGCAAGCTTTCTAGACCAT
TCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCA
TAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTG
GATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAA
TCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAG
CGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGT
TGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATG
ATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAAT
ATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACG
TTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAA
CATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAAC
ACGCCACATCTTGCGAATATATGTGTAGAAACTGCCGGAAATCGTCGTGG
TATTCACTCCAGAGCGATGAAAACGTTTCAGTTTGCTCATGGAAAACGGT
GTAACAAGGGTGAACACTATCCCATATCACCAGCTCACCGTCTTTCATTG
CCATACGAATTTCCGGATGAGCATTCATCAGCGGGCAAGAATGTGAATAA
GGCCGGATAAAACTTGTGCTTATTTTTCTTTACGTCTTTAAAACGCGTAT
ATCCAGCTGACGGTCTGGTATAGTACATGAGCACTGACTGAAATGCCTCA
ATGTTCTTACGATGCATGGGATATATCACGTGTATATCAGTGATTTTTTT
CTCATTAGCTCTTAGCTCTGAAGATCATACTCGAAGCTACTTAACG
UFO07149.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:19:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33169-RC | 396 | CG33169-RC | 120..293 | 9..182 | 870 | 100 | Plus |
| CG33169-RA | 633 | CG33169-RA | 120..293 | 9..182 | 870 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:19:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22863983..22864156 | 9..182 | 870 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 22:19:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| transib1 | 2167 | transib1 TRANSIB1 2167bp | 232..299 | 751..818 | 123 | 68.1 | Plus |
UFO07149.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:22:51 Download gff for
UFO07149.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33169-RA | 120..296 | 9..186 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:52 Download gff for
UFO07149.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33169-RA | 120..296 | 9..186 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:48:05 Download gff for
UFO07149.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33169-RA | 120..296 | 9..186 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 22:48:05 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-05 01:02:52 has no hits.
