UFO07151.5prime Sequence
1120 bp (1003 high quality bases) assembled on 2009-09-30
> UFO07151.5prime
CAGTCGACATGGAGAACGACGCCGGTGAGAATGTTGATCTGTACGTGCCC
CGCAAATGCTCGGCGTCCAACAGGATCATCCACGCCAAGGATCACGCCTC
CGTGCAGCTGAGCATCGTGGATGTGGACCCCGAGACCGGTCGCCAGACCG
ACGGTTCCAAGACCTACGCCATCTGCGGCGAGATCCGTCGCATGGGCGAG
TCCGACGACTGCATCGTGCGTCTGGCCAAGAAGGACGGCATCATTACCAA
GAACTTCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAA
GTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGG
AGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCG
GCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTA
CTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCC
GCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGA
CATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATC
AGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGC
GAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCA
CCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGG
AAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAATATATGTG
TAGAAACTGCCGGAAATCGTCGTGGTATTCACTCCAGAGCGATGAAAACG
TTTCAGTTTGCTCATGGAAAACGGTGTAACAAGGGTGAACACTATCCCAT
ATCACCAGCTCCCGTCTTTCATTGCCATACGAAATTCCGGATGAGCATTC
ATCAGGCGGCCAGAATGTGAATAAAGGCCGGATAAACTTGTGCTTATTTT
TCTTACGGTCTTTAAAGCCGTATATCAGCTGACGTCTGTTATAGTACATG
ACACTGACTGAATGCTCAAATGTTCTTACATGCCATTGATATCACCGGGA
AATCCAGATTTTTCATTAGC
UFO07151.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:55:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpS21-RD | 415 | CG2986-RD | 99..347 | 9..257 | 1245 | 100 | Plus |
| RpS21-RB | 619 | CG2986-RB | 75..323 | 9..257 | 1245 | 100 | Plus |
| RpS21-RA | 391 | CG2986-RA | 75..323 | 9..257 | 1245 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:55:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2856376..2856569 | 58..251 | 970 | 100 | Plus |
| 2L | 23513712 | 2L | 2856256..2856305 | 9..58 | 250 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 18:55:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| transib1 | 2167 | transib1 TRANSIB1 2167bp | 232..299 | 826..893 | 123 | 68.1 | Plus |
UFO07151.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:22:50 Download gff for
UFO07151.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| oho23B-RB | 109..369 | 1..263 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:21 Download gff for
UFO07151.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpS21-RA | 68..328 | 1..263 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:41:29 Download gff for
UFO07151.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpS21-RA | 68..328 | 1..263 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:41:29 Download gff for
UFO07151.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2856249..2856305 | 1..58 | 93 | -> | Plus |
| 2L | 2856377..2856569 | 59..251 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:21 Download gff for
UFO07151.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2856249..2856305 | 1..58 | 93 | -> | Plus |
| arm_2L | 2856377..2856569 | 59..251 | 100 | == | Plus |
