UFO07155.5prime Sequence
1111 bp (1003 high quality bases) assembled on 2009-09-30
> UFO07155.5prime
CAGTCGACATGCGTTTCTGTCTACTGTTCCTTTTGGCCATGAGCTGCTGT
CTGCTGCAATTCTCCGTGGCTGGAGTGAATTTGGTGCGCGGACTGGAGGC
TGCCGGTCATCATCGCAACTTCACCGGCTCACCACCACCGCGTGGTGCTC
CTCCACCACCTCGGACCACCACCGCCAGTTCTTCGGGTGCAAGCTTTCTA
GACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCA
TAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAG
TGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTG
AACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAG
TCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAG
TACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAAC
GGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCG
TATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTG
GCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGAC
GAAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCA
CCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACTGCCGGAAATC
GTCGTGATATTCACTCCAGAGCGATGAAAACGTTTCAGTTTGCTCATGGA
AAACGGTGTAACAAGGGTGAACACTATCCCATATCACCAGCTCACCGTCT
TTCATTGCCATACGAAATTCCGGATGAGCATTCATCAGGCGGGCAAGAAT
GTGATAAAGGCCGGATAAAACTTGTGCTTATTTTTCTTTACGGTCTTAAA
AGCCGTATATCCAGCTGACGGTCTGGTATAGTACATGAGCACTGACTGAA
ATGCTCAAATGTTCTTACGATGCCATGGATATATCACGGGTGGTATATCA
GTGATTTTTTTCTCCAATTTAGCTCTAGCTCTGAGGATTCTAACTCGAAG
CAACTTAACCG
UFO07155.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:54:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32726-RB | 317 | CG32726-RB | 18..197 | 9..188 | 900 | 100 | Plus |
| CG32726-RA | 458 | CG32726-RA | 18..197 | 9..188 | 900 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:54:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7425481..7425613 | 188..56 | 665 | 100 | Minus |
| X | 23542271 | X | 7425679..7425726 | 56..9 | 240 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 18:54:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| transib1 | 2167 | transib1 TRANSIB1 2167bp | 229..299 | 755..825 | 129 | 68.1 | Plus |
UFO07155.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:17:45 Download gff for
UFO07155.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32726-RA | 11..200 | 1..192 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:57 Download gff for
UFO07155.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32726-RA | 11..200 | 1..192 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:41:06 Download gff for
UFO07155.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32726-RA | 11..200 | 1..192 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:41:06 Download gff for
UFO07155.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7425481..7425612 | 57..188 | 100 | <- | Minus |
| X | 7425679..7425733 | 1..56 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:57 Download gff for
UFO07155.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7319514..7319645 | 57..188 | 100 | <- | Minus |
| arm_X | 7319712..7319766 | 1..56 | 94 | | Minus |
