UFO07165.5prime Sequence
1140 bp (1019 high quality bases) assembled on 2009-09-30
> UFO07165.5prime
CAGTCGACATGAACTACAACGCCAAGCGAGTAATGCGACAGAACTCGGTT
TGCGTGGGTTCCAACGACATGGCAGCGTCGCCGATAATGATTGGACCTGC
CCCGCCCTCGGCGCCCAGCACGCCGCAACTGCAGACCACCGAGGACATCA
AGCCACTGCTTGTGCAGCGCCAAGTGATTCTGCTGCAAAGTGGAAGCATA
CCGACGAATCCCTCGCCACAGCAGATCAACCTAGCTGGACATAATGTAGC
CGGTGGTGCCAGCGGGAGCAACGTTGCCAACGTTCTCATTCCGGATGATG
CACCTGTCTCACTGCTCACAGAGATTGCGGATATCATGCGAAGCTTCGGC
GACAGCGATCAGCCCAGGACGGGAAGTGTCAAGCTGGTGGAGCAGATCCT
GCAGCAGCAGCTGCGCGGCATCTTCAATGAGGCTTCGCTGGTGGCCATGC
GGCGGAAACAGAATCCCTGCCCGTCGCAGGCGGACTTTGAGTTCCTGATG
CGCAACCATCCGGTGAAGATAGCTCGGATGCGAAAGCACCTCAAGGATAT
GCGCATACTCAAAAGGTTCCTTAGTATCCGCACGGGAAGGCCGCAGGACT
TCATGGACGACTTGGAGCAGCAGGAGGAGGACGAGGAGCTGGCCATCGAT
GTGTACGAGCTACACGACGAGGACCGAATGCGAAGATTATTCCGCGCAGA
TCGGATATCGCAGATCCTTACGGGCCAGCAATACCTGGAGTTCAATGAGG
CGCGCAAGACGTCATTCTACTGCCGCCATGGGGGAGAAGATCAAGAACAA
GTTCCGCCGCTTTCTGGACCTGCCCGCGGACCTTCGCATCCCAACGCCGA
CAATGAACATTTTGGCCTATCTGGCGCATGAGACCATTGCCGCCATTGTC
GACTATTCGATCCTGACGCGCCTGAACTCGGACACCGTGCGACCGAGCCC
TACAGCGAGTGACTCGCCGGAGGCAGTCCGGCTATGATGCACGTCTGTCG
AGTCACACAGGTCGCGGCATGAGTGTCAGCATCATGTTACGGAAGATCAC
GAGCATGCTCGTTCGGCAATGACAGCGGTAGATGGCGGGAATCGCACTCT
TGCAACTCGATCGGTCGAATTTCTAGCATGCAGCTTTCTG
UFO07165.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:46:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Spt3-RA | 1395 | CG3169-RA | 71..1090 | 9..1021 | 4890 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:46:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12017226..12018219 | 9..999 | 4745 | 99.4 | Plus |
Blast to na_te.dros performed 2014-11-28 19:46:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gypsy8 | 4955 | gypsy8 GYPSY8 4955bp | 4406..4443 | 374..411 | 118 | 78.9 | Plus |
UFO07165.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:17:38 Download gff for
UFO07165.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spt3-RA | 69..1093 | 9..1026 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:50:20 Download gff for
UFO07165.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spt3-RA | 71..1095 | 9..1026 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:07 Download gff for
UFO07165.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spt3-RA | 71..1095 | 9..1026 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:07 Download gff for
UFO07165.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12017226..12018250 | 9..1026 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:50:20 Download gff for
UFO07165.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7842948..7843972 | 9..1026 | 98 | | Plus |
