UFO07167.5prime Sequence
1110 bp (1004 high quality bases) assembled on 2009-09-30
> UFO07167.5prime
CAGTCGACATGGCCCGCCGAACACAATCGCGTTATATCTTTGACATCGAG
GATAACTTCCGTGTGTTTCGCCACCAGTTTTTCGTCAACGGTGCAAGGAG
AGCGGATTGCACAACCTGTGAAAGTCGAGTGCCAGTCAGCGAACCATACC
ATCATCATTGGCGAAATGATATCGAGAACAATAGAAGCCATTGCATTCAA
ATTGGTTCTGATGAAAAGGATATCCTGAAGAGGATCGAGGACCAGGCCAT
CGAAGAGTTTATCTTGTGTGATGGAAGCATTGCGGCCAGGACCAACGACT
TTCTTCTGGATGCTGGGATGGATGCAGTTCCGCAACTGCTGCGATTTTTA
AGTTTTGGTACAGAAAAATTGGAGACCACAGTTGGATTTTACGTGGATGT
GAAAAAGGAGCGAATGTACTACGAAAGCAGTCCGTTAAATATCGAAAACC
ATTTCGATATTGGTGAGGCGGTGGACATGATATTCTCCATGCTGCTGGAG
AAGATCAGCAACTACGTGCTGCTCCATCAGAAGGTTCCACTGGAGGCGTG
TGTCATCAGAAGGATGAAGGTGACGGTCAAGAGATTTTGCGTCTCGCCTA
AGAGCAATTCTCTTAAACTTCCTTTGCAGTACCGAGTAAAAAACGCAACA
GAAGTCATTGGAAATGGAAGTAATAAGCATTCCTCCGATTTAGCACAACT
TTCTGAAACTTATATAAACCAAAAGGACCAAAATCAACACATTCCGGCAA
CTCTAAAAATAAACCTGTACACTTTTCGGGTCTGCAGCACTTCCAAGGAA
TTATTTGCAGTACCATATTTGCTCCGAGGCGATGATGTCGAAAACACACC
CACCTTCATCATTCAAACGGACGTAGTTGGTGACTTTCGGGGCTTACTTG
AGATCCGAAACATAAGAAGTTCCTGCGCGTGATACCCACGATCGAGTGTC
GAGTGCGCAGTGTCAATCCCACTTTGTGACGGGTGCACTGCGCTCACAAA
CAATCGCTGTGCAGACTTATGTGTGCACATGACAGACGCATCGAGTGCAC
GAGATGGCTGCTCTGCAAGGAATACTCAATATGAATGGGTTCGATGCCAG
CAGCATGCAG
UFO07167.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:49:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6885-RA | 1212 | CG6885-RA | 21..1133 | 8..1090 | 4825 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:48:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18744508..18745483 | 8..978 | 4650 | 99.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:49:00 has no hits.
UFO07167.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:17:36 Download gff for
UFO07167.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6885-RA | 11..990 | 1..978 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:51:44 Download gff for
UFO07167.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6885-RA | 17..996 | 1..978 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:30:10 Download gff for
UFO07167.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6885-RA | 17..996 | 1..978 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:30:10 Download gff for
UFO07167.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18744504..18745483 | 1..978 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:51:44 Download gff for
UFO07167.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18737604..18738583 | 1..978 | 99 | == | Plus |
