UFO07168.5prime Sequence
1107 bp (1025 high quality bases) assembled on 2009-09-30
> UFO07168.5prime
CAGTCGACATGGACGACCAGGCGTGCCCGCGGTGCAAGACCACCAAATAC
CGGAATCCATCGCTCAAGCTGATGGTCAACGTTTGCGGACACACATTATG
CGAATCTTGCGTGGACTTGCTGTTCCTCAAAGGATCCGGCGCCTGTCCAG
AGTGCATGGTCCCATTGCGGCGCAACAACTTCCGCGTGCAGCTTTTTGAG
GACCCAATGGTGGAGAAGGAGGTGGATATTCGTAGGCGAATTCTGCGCGA
CTACAATAAACGTGAGGAGGACTTTGCCTCCCTGGCGGAGTACAATGACT
ATCTGGAGGAGATCGAGGACATTGTGTACAATCTGTGCAACAACATCGAC
ATCATCGAGACAAACAAGCGTATTGAGGCCTACAAGCGTGATAACCGTGA
GGTCATTCAGCGGAATAAAACCCGCGTGGGACGCGATGAGTACGCGTTGG
AGGAGATGCTGGAGCTGGAGAAAGTTCAGGAGGAGGCGCGTAGGAAGGAG
CTGGAGGAACTGGAGAACGAGCACAAGAAGAAGAAGGCCCGCGACAAGCA
GGCGCTGATCGAGGAGCTGATGTACAGCGGCAAGGATGCCGCCCAAATTG
TCACCGAGTTCGCCGAAAAAGCGGAAAAGCAGCGCGAGGAGGAGAAACAG
CTTCCACCGCCGAAGCCCGCCAACGAGTTCTCTACGGGCATAAAGTTCGG
ACAGACAGCTGATCCCAGTCTGCTGCCCGTTCCCAAATCGGAGGAGGGTC
CACTTTTCGTATACGAGCCACTTGTTCCTTTCAGTGAGGGACCTGCCATG
CCGCCCACAAATGAGATCGTGTCCAGGGGCTATATTGCCCACATACGAGC
TGAAACACCGCAGGAGACGCCGGCGGATTCACATCCGCTCTGGCTTGTGA
ACGGGCGCTTCAGAGCGCTGCAGGACTCTACTATACGGCTACACGGGTGT
GTATCTGGCACGCAGCTTTCTAGACATCGTTTGGCGGCCGCCCAGGTAGT
GTCATAATCATATCATATCATATCATAATCACACTAGCTAGGAGATCTGT
CATGACTAGTGCTGATTCCTCACCATAAAACGGCGCGCACGAGCGTCGAA
CATCGAT
UFO07168.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:02:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mat1-RA | 1213 | CG7614-RA | 110..1079 | 9..972 | 4655 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:02:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10738751..10739720 | 972..9 | 4525 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:02:45 has no hits.
UFO07168.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:17:35 Download gff for
UFO07168.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mat1-RA | 111..1084 | 1..972 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:13:54 Download gff for
UFO07168.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mat1-RA | 106..1079 | 1..972 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:48:08 Download gff for
UFO07168.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mat1-RA | 106..1079 | 1..972 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:48:08 Download gff for
UFO07168.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10738769..10739724 | 1..954 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:13:54 Download gff for
UFO07168.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6626274..6627229 | 1..954 | 98 | | Minus |
