UFO07181.5prime Sequence
1100 bp (979 high quality bases) assembled on 2009-09-30
> UFO07181.5prime
CAGTCGACATGAGCTACTACTACTCGTCTGCCTCCGAGGAGGATGGCAGT
TCCCAGTACCTGGGCAGTCCCAACTACAACTTGACCCAGTTGCCGCCAGT
TTCTGGCCAGGATTACGGACAGGGGGCTTTCTTATCGCCGGAATGGCAAT
TCTTGGATGCCGCAGGCGGAACTCAAACGGAACTAGGACCCATCATGGAG
GCGCAAGGACAGCACACCCAGCCGCAGACCAAACGGCGGAGTAACAGCTT
CACAGGATCGGACGGTAGGAAGAGCAGTCCAGAGCAGACCAATCTCAGTC
CCACGGTCCAGAAAAGGAGACGACAGGCTGCCAATGCGCGGGAAAGGAAG
CGGATGAATGGATTGAATGCGGCTTTCGAGCGCCTAAGGGAAGTGGTGCC
CGCTCCGTCCATTGACCAGAAATTGTCCAAGTTCGAGACTCTCCAGATGG
CCCAGTCCTACATCCTGGCGCTGTGCGATCTTCTCAACAACGGGGACGTG
GAAGTGGATGCCGCTGCATACACCATCTTCGGCGACAGCGATAGTGGATT
TGGATTGAGCGGAGGATCCTTGTCAGCAAGCTTTCTAGACCATTCGTTTG
GCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCAT
AATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTC
ACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGAT
GGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTC
GATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATT
CATTAAGCATTCTGCCGACATGGAAAGCCATCACAAACGGCATGATGAAC
CTGATCGCAGCGGCATCAGCACCTTGTCGCTTGCGTATAATATTTGCCCA
TGGTGAAAACGGGGCGAAGAAGTGTCATATTGCACGTTTAAATCAAACTG
TGAACTCACCAAGGATGCCTGAAACGAAAACATATTCTCAATAACCCGTT
AGGAATAGGCAGGTTTCACGGTAACAGCCCACTTGCAATATTGTCAACTG
UFO07181.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:54:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| cato-RA | 712 | CG7760-RA | 39..605 | 9..575 | 2835 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:54:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16277792..16278358 | 575..9 | 2835 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:54:39 has no hits.
UFO07181.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:17:27 Download gff for
UFO07181.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cato-RA | 1..570 | 9..576 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:06:43 Download gff for
UFO07181.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cato-RA | 35..609 | 1..576 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:29:24 Download gff for
UFO07181.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cato-RA | 34..605 | 1..575 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:29:24 Download gff for
UFO07181.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16277792..16278363 | 1..575 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:06:43 Download gff for
UFO07181.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12165297..12165868 | 1..575 | 99 | | Minus |
