UFO07184.5prime Sequence
1132 bp (1011 high quality bases) assembled on 2009-09-30
> UFO07184.5prime
CAGTCGACATGTCGCTTGCACGTTTCCTATTTTATATTCTCGTGTTCAGT
TCACTCTACTGTGACTTATTGGCATTGGAGCACTTCATTGTGGGTGGCCA
GAATGCAGCTGAAGGAGATGCCCCCTACCAGGTGTCGCTCCAAACTCTTT
TGGGTAGTCACCTATGCGGTGGTGCCATCATATCGGACCGATGGATAATT
ACGGCTGGTCACTGTGTCAAAGGATACCCGACTAGCAGACTTCAAGTGGC
CACTGGTACAATTCGCTATGCGGAACCAGGAGCTGTTTATTACCCAGACG
CCATCTACCTGCACTGCAACTATGACAGTCCCAAGTACCAGAATGATATT
GGCCTGCTCCACCTGAACGAGAGCATTACCTTTAACGCACTAACTCAGGC
GGTTGAACTACCCACATCCCCTTTTCCAAGAGGAGCTTCGGAGCTGGTTT
TCACCGGATGGGGATCTCAGTCAGCGGCGGGGTCGTTGCCATCGCAGTTG
CAGCGTGTCCAGCAGCAACACCTCAACTCCCCGGCTTGCGAGTCCATGAT
GTCTGCCTACGAGGATCTGGAACTGGGACCTTGCCATATTTGTGCTTATC
GTCAGGCAAATATTGGAGCCTGCCACGGAGATTCTGGAGGTCCTCTAGTT
CACCAGGGCACCCTGGTGGGCATACTCAACTTCTTTGTACCCTGCGCCCA
GGGTGTGCCTGATATATTCATGAATATAATGTACTACCGCGACTGGATGC
GACAAACGATGAGTGGCAATGGCAAATGTGCACAGGTCAACCAGCAGACA
ATAGATGGAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGT
AAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTA
GGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACAATAAAAAACGCCC
GGCGGCAACCGAGCGTTCTGAACAATCCAGATGGAGTTCTGAGGTCATTA
CTGGATCTATCACAGAGTCAGCGGAGCTCGAATATCAATTACGCCCGCCT
GCCACTCATCGCAGTACTGTTGTATCATAGCATTCTGCGACTGAAAGCCA
TCAACGCATGATGACCTGAATCGCCAGCGCAT
UFO07184.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:26:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17477-RA | 851 | CG17477-RA | 8..809 | 8..809 | 4010 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:26:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17126130..17126931 | 809..8 | 4010 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:26:17 has no hits.
UFO07184.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:17:32 Download gff for
UFO07184.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17477-RA | 4..812 | 1..813 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:20:00 Download gff for
UFO07184.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17477-RA | 4..812 | 1..813 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:57:57 Download gff for
UFO07184.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17477-RA | 4..812 | 1..813 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:57:57 Download gff for
UFO07184.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17126112..17126935 | 1..826 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:20:00 Download gff for
UFO07184.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12951834..12952657 | 1..826 | 98 | | Minus |
