UFO07187.5prime Sequence
1077 bp (972 high quality bases) assembled on 2009-09-30
> UFO07187.5prime
CAGTCGACATGACTTCTCCGAGATTGTTTGTTCTCGAAGATCTGTTCAAG
TTTAACAATATTGTGATGGATCCCTTGGCGGAAGTGTACTCCTTGCCATT
CTTGCTTCCCAAGATTCTGGAGCATCCCGAACTGGTTCTTGCCGCCGATG
CTCCTGACAATAGTCTCATGGGCTTCATTCTGGGGACACGCGTCGAGGAT
GCGACTGAATCTTTTGGAGATGCAAAGACTATGACCTGGAATCATGGACA
CATCTCTGCTCTGGCCGTAGCTCAGGATTATCGTAAACTGGGCTTGGGCA
CTCGGCTCTTAACAACCGTTAGGGATATGATGGATCGTCAGAAAGACTTT
TATATAGATCTATTTGTGCGAGAGAAGAATACAATTGCCATTGGGCTTTA
CGAGTCCTTGGGATATGTGAAATATCGCTGGATACCTAAGTTTTATGCCG
ACGACCATGGATACGAAATGAGACTACCTTTGTCCAGCGATGTGGATAGG
AAATCCTTAGAGGGAATAATAATCAAGAAAATCTACAGCTTTGGCAATAA
GTTGTACTATCTGCTGATGTTTTACATATTCGGAATTATAGCTATAGTTA
TTGGTGGAATATTGGTTGAAGCAAGCTTTCTAGACCATTCGTTTGGCGCG
CGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCA
CAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAA
TAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGT
TCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATAT
CAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAA
GCATTCTGCCGACATGTAGCCATCACAACGGCATGATGAACCTGATCGCA
GCGCATCAGCACTTGTCGCTTGCGTATATATTTGCCCATGTGAAACGGGG
GCGAAGAGTGTCATATGCACGGTTAAATCAACTGTGACTCACAAGATGGC
TGAACAGAAACAATCTCAATAACGTTA
UFO07187.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:54:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31851-RB | 1168 | CG31851-RB | 203..815 | 8..620 | 3065 | 100 | Plus |
| CG31851-RA | 860 | CG31851-RA | 203..815 | 8..620 | 3065 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:54:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13257679..13258291 | 8..620 | 3065 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:54:34 has no hits.
UFO07187.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:17:23 Download gff for
UFO07187.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31851-RA | 195..818 | 1..624 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:53 Download gff for
UFO07187.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31851-RA | 195..828 | 1..633 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:41:03 Download gff for
UFO07187.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31851-RA | 195..828 | 1..633 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:41:03 Download gff for
UFO07187.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13257671..13258304 | 1..633 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:53 Download gff for
UFO07187.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13257671..13258304 | 1..633 | 98 | == | Plus |
