UFO07188.5prime Sequence
1116 bp (1004 high quality bases) assembled on 2009-09-30
> UFO07188.5prime
CAGTCGACATGAAATACACCGCCCTTTGGCGCTCGGTGGGCGCCATGAGC
TGCGGATCCCTGGTCACCTACTTTGCCATCCGGCTGTTCGATGGCCTGGA
ACCCTCCATGTTATCAGGTGGAGCACAAGGGGGTAAGGGGCGGGCGATTG
AACCTTTGGCCAGTGGCGCCTGGCGGCACCATTGGGACTTGGACAAGCCG
CAGCTGCAAAAGGTGGCAAATGGCGAGGAGTCCTCCGCCCTGCGACACAT
TATCCTGGTGAGACATGGCGAGTACACGAGGACCCCGAATGGAAGCCACC
TCACGGAACTGGGCCGTCGGCAGGCGGAACGGACGGGGCAAAGGTTGCGG
GAAATGGGCTTGTCCTGGGACCACGTGGTGGCCTCTACAATGCCGCGTGC
CGAGGAGACGGCCATGATCATCCTGAAGCAGCTGAACCTCGATCCCCTGA
AGATGAAGCGCTGCACTTTGCTGCCGGAGGGCACTCCGTACCCAGGAGAT
CCCCCCTCCAAGAGGAGTGCCCGCAGCCTGGACCTGGCCTATCAGAGGGA
TGGTCCGCGGATCGAGGCCGCCTTTAGGCGCTACTTCTTCAGGGCCAGTC
CGGAGCAGGAGCACGACTCGTACCTGCTCATCGTGGGCCACTCGAATGTG
ATCCGTTACCTGATTCTGCGGGCCCTGCAGCTTCCTCCGGCCGCCTGGAC
GCGCCTCAACCTGAACCACGGCTCCATCACCTGGCTGACTGTGTGGCCGT
CTGGCTACGTTACCTTGCGCTGCTTGGGGGACTCCGGCTTCATGCCGGTG
ACCGAGATCACCCATCGAAGCCGTCACCGGCGAAATCCGGCAGTAACGCA
AGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGTCATAAT
CATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCTGGTCA
TGACTAGTGCTTGGATTCTCACAATAAAAAACGCCGGCGGCACCGAGCGT
TCTGACATCAGATGAGTCTGAGTCATTACTGATCTATCACAGGAGTCAGC
GAGCTCGATTTTCATACGCCCGCCTGCCACTCATCGAGTCTGTGAATCAT
TAGCATTCGCCGACTG
UFO07188.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:22:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pgam5-2-RA | 1390 | CG15874-RA | 37..877 | 8..847 | 4180 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:22:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24431857..24432697 | 847..8 | 4155 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:22:40 has no hits.
UFO07188.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:17:22 Download gff for
UFO07188.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15874-RA | 1..843 | 9..848 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:19:00 Download gff for
UFO07188.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pgam5-2-RA | 28..882 | 1..854 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:56:19 Download gff for
UFO07188.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pgam5-2-RA | 28..882 | 1..854 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:56:19 Download gff for
UFO07188.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24431852..24432704 | 1..854 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:19:00 Download gff for
UFO07188.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20319375..20320227 | 1..854 | 99 | | Minus |
