UFO07193.5prime Sequence
1134 bp (974 high quality bases) assembled on 2009-09-30
> UFO07193.5prime
CAGTCGACATGCTGAAGCGCAAACTGAACCAGCAAAAATGCAATCTGGAG
ATTGGGGAGCCCACTAAGACATCCGCAAGGCAGGGCAGTACATCGGAATT
CTTTGATAAGCCGCTGTGGCTTAAATTCTACGAAACCGAAGTCAAGTTAA
ATGAGGCGCTGGAAAAACTGAATCCTCCTGAGAGCACACCGTTCATCTAC
AACCCGATAGTATATGCATCCCAGCTGCACTGCGACTATTTACGTCGCTA
TATGGACGGTCCCAAGAAGCTGGTATTTGTTGGCATGAATCCAGGGCCCA
ATGGAATGGCCCAAACCGGAATTCCCTTTGGCAATGTGCGCACAGTAAAG
TTGTTAATGCAGCTGGCTGGTTCGGTGGACCAACCTCCAGTCGTGCATCC
CAAACGTCCAGTCGCTGGCTTGGATTGTCGGATTGAGGAGCCCAGTGGTG
TGCGTTTGTGGGAGCTGTTCCTCCGACTGGCTGGCAGCATGCAGACCTTC
TCCCAGCAGTGTTTCGTCCACAATTTCTGTCCGCTAGCTTTCTTTGGCGC
AGATGGCAGGAACATAACGCCCAGTGAAATCAGAGGAGCTTACAAAAATC
AGCTAGGAGACCTGTGCCTGCACACCCTGGAGGAACAACTGAAGCTCCTC
CAACCCGACGTGATTGTGGCCGTTGGGGAGTATGTTCACAGCGCACTGAA
GCGTTCAGGATATGCCAAATCCAATTGCGTTTCGGTGCTCCGACTGCCGC
ATCCTAGTCCGCGTTCTACTAATAATACCAATTGGCCCGAGAAGGCTCAA
GCATTTTTGGAGGAGCACAACCTAATCCGATTCATGCGGAATGAGGCTGC
AAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATT
ATCATAATCATATCATAATCATAATCACAACTAGCCTAAGAGATCCTGGT
CATGACTAGGTGCTTGGATTCTCACCAATAAAAACGCCCGCGGCAACCGA
GCCGTCCTGAACAAATCCAGAATGGAGTTCTGAGTCATTACTGGATCTAT
TCAAAAGAGTCAGCGAGCTCGAATATCAAATTACGCCCGGCCTGCCACTC
ATGCAGTACTGTTGTATTCATTAGCATTCGGCCG
UFO07193.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:02:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5285-RA | 983 | CG5285-RA | 70..909 | 9..848 | 4200 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:02:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17151029..17151556 | 321..848 | 2640 | 100 | Plus |
| 3R | 32079331 | 3R | 17150656..17150967 | 9..320 | 1560 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:02:42 has no hits.
UFO07193.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:17:17 Download gff for
UFO07193.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5285-RA | 1..843 | 9..851 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:13:52 Download gff for
UFO07193.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5285-RA | 62..915 | 1..854 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:48:06 Download gff for
UFO07193.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5285-RA | 62..915 | 1..854 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:48:06 Download gff for
UFO07193.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17150648..17150967 | 1..320 | 98 | -> | Plus |
| 3R | 17151029..17151562 | 321..854 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:13:52 Download gff for
UFO07193.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12976370..12976689 | 1..320 | 98 | -> | Plus |
| arm_3R | 12976751..12977284 | 321..854 | 99 | == | Plus |
