UFO07194.5prime Sequence
1100 bp (1012 high quality bases) assembled on 2009-09-30
> UFO07194.5prime
CAGTCGACATGGGCACCAAGGCGTCGGGGGCCAAATTCAATTTTCGTCCC
CAGGTGCGCACCTTCGCCAATCCCAGCTCGGTGACCACCTCCACGGTCCC
GGTGGCAGCAGAAACCAAGCTGTCGGACCAGGAGGCGCTGGAGGAGATCC
GCCAGCTGAGCATGCAGCTGCAGCGCATCCAGGAGATGGCTCCGCCCAAG
GGCGTGGCGGTTATGACGATCTCCAGCCTGCTGGACGGCCTAAAGACACC
CGGTGGCCTAATGGTTGTGGCGGCGGCGGCGGGCGCCACTGCCCAAGGCC
ACTCGGCCGCCAATCGCCAGAGCGCACTGCCCCTGCTCGCCCTGAACGTG
GAGATGCAGAAGTACAGCCAGCAGAACAACAACTCCAACGGGGGTCGGGG
GAGTGGCCGAACCAGTATTCCCACCATGGTGCTGGAAACGCCGCCCAGCT
CGACGCCCCCGTCGGCGGCTTACGAGGAGCGGGCCGTGAACACGGAGCTC
AGTGGCGACGACTTCCGGGAGCAGCTGCTGCGGCGAACGGCCGATGGCCA
CATCATCTGCAGTCGCTGCCTGGACGCGTCCAAGGAGCACTACTACTGCT
GTCCGCCGCGCAGCGCCTGCGACCATCTCGGCTCGCCGAAGGAGGAGGGC
AGCCTGAGCTTCGCCAACATCAAGCTGGAGTGTATGTGCTCCCAGTCGGA
GGACCTTGACCAGGACGTGGGCCAGCGCCAGCGGAGGCCCACGGTGCGAA
CGGCGGCCACCAATACGCCGCCGACCAGCTGCAAACGGGCTCCACGCAAC
CTGCTGGAGGCCGAGCTCAGCATTTCGTATCAAATTTGTGATAACTGTAG
AGTAAGTACAAGCTAACTGGGCCGCCGACGCAGCGGCAGCTACTCCCAGG
CTCAGAGAATCCCCAGCTGGGCCAGCAGCCGGCTGGACAGTTGCCCATCC
AATCCCGCAGCACCGAGCTTCTGACCGCACCACGCGCTGAGTCGAGACGA
GTCGAGGCGAGACAGCGCCACTCCACGACGACTAGTCTGTACTCAGTGCA
CCGAGGAGCTGGCGCTACCTGCCGAGTCGTGCGCACCCTCTGGCATTGTT
UFO07194.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:54:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43795-RA | 5891 | CG43795-RA | 3574..4651 | 4..1063 | 4900 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:54:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23489785..23490661 | 109..983 | 4190 | 99.5 | Plus |
| 2R | 25286936 | 2R | 23487140..23487247 | 4..111 | 525 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:54:36 has no hits.
UFO07194.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:17:26 Download gff for
UFO07194.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34372-RC | 1788..2883 | 1..1076 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:55 Download gff for
UFO07194.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43795-RA | 3572..4667 | 1..1076 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:41:04 Download gff for
UFO07194.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43795-RA | 3572..4667 | 1..1076 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:41:04 Download gff for
UFO07194.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23487138..23487247 | 1..111 | 98 | -> | Plus |
| 2R | 23489788..23490773 | 112..1076 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:55 Download gff for
UFO07194.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19374661..19374770 | 1..111 | 98 | -> | Plus |
| arm_2R | 19377311..19378296 | 112..1076 | 97 | | Plus |
