UFO07196.5prime Sequence
1115 bp (1017 high quality bases) assembled on 2009-09-30
> UFO07196.5prime
CAGTCGACATCCCCGAGATCGAAGGTGCAAATGCCAGTGTCAGCACCTCG
AAACAAAGCGAACGCAAAGTGAATCCTCTGGGCAAACTAAACAAACGCTT
CTTAGGCCGCACCATAAACACCGCGATTCGGCATAATGATAGAGAAAAGG
AGCGCACACAGGCAAATTGCCGACAGAAGCTGCAGGATCTGGATGATGTG
CACGAAAGGAGGAAGTCCAACTACTTTTACAGCCGCGATGCACCCAGAAC
TCAAAGTGTTGATAGAAGCAGAAGTTCCAGCAGAAGGCGCAGCAGGAGCC
GCCACAAAAAGGCCAAGAAGCATCGCAGCCGAAGAAGAACTAGGAGCAGC
AGAAGTTCAAGCCGCAGTCGAAGTCGCAGCAGTTCACATCGGCGAAAAAA
GCGCAAAAAGAAGGTTAAAAAACACAAAAAATCACACAGAAGACGAAGAA
GCAGCCAGAGCAGCAGCGGTTGCGATTGGGAATCCGCACCCAGCGAGTCG
TTACGTATACCCCCGCCTTCAGATGTGTTCCTAAACCACTCCAAGCAAAT
GGCTCTTGCAGTGGCCATGGCCTATGGTCAATTACTAAACCCGAGCAGCC
AAAAGAAAGCCAGCGAGTCTAAGGAACACTCCTCCTCTCCTATAAGCGAT
ATATTCCGGGAACTTATGTCCGACGAAGAGGTGGACAAATCCGAGAAGCC
CGAGGCCCTGTCCATTTCATCCAGCGACGAAGAGCCAAATGTTCTCACCA
TTAAAGTAAGCTCGAGCTCCGAGTCCAGCGGCAATAAATCAAGCTCGGAC
TCAGATTCAGAAGCAAAGAACAGCGTACGCAGCTGTATAACCCTAGAATC
TGGTGATAATAGTGATATTGAGATAATTGAGTACCATGAAGAGCCCAAAA
AAAAGGCATGTGAAACTGAACCTGCGTCTGAACCTGAATATCCGTCTCAT
CGGATAGCACAAATCAACAAGTGACGATAGCACAGCTGTCACTACAGTGA
CCTGACGAGATGCAGCTTTCTAGACATCGTTTGGCGCGCGGCCAGTAGTT
GTCATATCATATCCATATCTAATCTATCATATCCAACTAGCCTAGGAGAA
TCTGTCATGAACATA
UFO07196.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:41:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14074-RB | 1149 | CG14074-RB | 62..1057 | 14..1006 | 4905 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:41:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18866344..18867331 | 14..999 | 4840 | 99.8 | Plus |
Blast to na_te.dros performed 2014-11-28 20:41:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| roo | 9092 | roo DM_ROO 9092bp | 1063..1155 | 325..414 | 132 | 66 | Plus |
UFO07196.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:17:24 Download gff for
UFO07196.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14074-RA | 110..1119 | 2..1009 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:36:11 Download gff for
UFO07196.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14074-RB | 52..1061 | 2..1009 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:11:36 Download gff for
UFO07196.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14074-RB | 52..1061 | 2..1009 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:11:36 Download gff for
UFO07196.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18866334..18867343 | 2..1015 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:36:11 Download gff for
UFO07196.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18859434..18860443 | 2..1015 | 98 | -> | Plus |
