UFO07201.5prime Sequence
866 bp (865 high quality bases) assembled on 2011-06-24
> UFO07201.5prime
CAGTCGGCATGCCCAAGGGTCGTGTTAGCAATGTGTGGCAGCACTACGAT
ATTAACGAGGAGTGCGAAAACTTTGCGATATGCCGTTATTGCGGCAACAA
TATATCGCGTGGTGGCATGGCCAGCAATTTGAAGGGCAACAATACGACCA
ATTTGTGGACGCATCTGCGGCACAAGCACAGGGACGAGGTGCTGGTCAGT
CCGGTGCAGCAACGTCCCCAGGCCCGGATGATCCCAATCATCAAGAAAGA
CAAAACCGTGCGGATTACCAAGGCCAAGACGCTGAGGGAGCCGCTGCGTG
TGGCCAAGCCGAAGATCGAGTCGAACGTCGCCAATTATCTGGGCGAGGCG
GGCGCCCTGCCGCAAAAGTGGGAGGAGTACGAGCAGAACGATGAGATTAG
CGAGGACATTAAGGACATCATATACAGCGAGGATCCACTGTGCTATAGTC
CTATACACGTGATGGATGATGAGGGCCTGGATCAGCCTGAGAAGCAAGTG
ACCGTGCTAACCCATTCGACTTCACCAGCCGGTGGAAGTAGCAGGCCCAT
CGGTGTTGGTTCGGGCGTACAGGCTACTGTGGTGGCCTCCACGTCCTCCA
GCAGCAGCTCGGCCAAGCAGCTGAAGAACAACCTGGAGACGTCCATCGAA
CGGCTGACCGCTGTCAGCGAACAGCTCAGCTACATCATACAACAGAATCA
CGAGGAGCTCACCAAGGACGACGACTACTATTTTGCACTTAGCTTGGTGC
CCGCAATGCGCCACCTTTCGCTCAGTCGGAAGATGTACGTGCCGGTCCAA
GATCCAGGATATACTGTTCAAGGAAAGTGAGGACTCACGCTTTGCCAAGG
ATGAGGCAAGCTTTCT
UFO07201.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:48:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| BEAF-32-RC | 1558 | CG10159-RC | 487..1332 | 9..855 | 4165 | 99.6 | Plus |
| BEAF-32-RB | 1173 | CG10159-RB | 102..947 | 9..855 | 4165 | 99.6 | Plus |
| BEAF-32-RA | 1192 | CG10159-RA | 361..966 | 249..855 | 2965 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:48:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14771798..14772404 | 248..855 | 2930 | 99.2 | Plus |
| 2R | 25286936 | 2R | 14771402..14771642 | 9..249 | 1205 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:48:25 has no hits.
UFO07201.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:43:27 Download gff for
UFO07201.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| BEAF-32-RB | 465..1315 | 9..861 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:03:08 Download gff for
UFO07201.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| BEAF-32-RB | 102..952 | 9..861 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:52:08 Download gff for
UFO07201.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| BEAF-32-RB | 102..952 | 9..861 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:52:08 Download gff for
UFO07201.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14771402..14771642 | 9..249 | 100 | -> | Plus |
| 2R | 14771800..14772409 | 250..861 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:03:08 Download gff for
UFO07201.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10658907..10659147 | 9..249 | 100 | -> | Plus |
| arm_2R | 10659305..10659914 | 250..861 | 99 | | Plus |
