UFO07218.5prime Sequence
1167 bp (1015 high quality bases) assembled on 2011-06-24
> UFO07218.5prime
CAGTCGACATGTCCACCTTGGCCAGCACTCGACCGCCCCCGCTCAAGCTG
ACTATTCCTTCCTTAGAGGAGGCAGAGGACCACGCGCAGGAGAGGAGAGC
GGGCGGAGGTGGCCAGGAAGTAGGTAAAATGCATCCGGATTGCTTGCCCT
TGCCGCTTGTCCAGCCGGGCAACTCGCCCCAAGTGCGGGAGGAGGAGGAG
GACGAGCAGACGGAGTGCGAGGAGCAGCTGAACATAGAGGATGAAGAGGT
CGAGGAGGAGCACGATTTGGACCTGGAGGATCCGGCCAGCTGCTGCAGTG
AGAATAGTGTCTTGAGTGTGGGCCAGGAACAATCGGAAGCAGCACAGGCT
GCGCTATCCGCTCAAGCTCAGGCCAGGCAGAGGCTTTTGATCAGCCAAAT
CTATCGACCGTCGGCATTCAGCAGCACTGCTACCACTGTTTTGCCGCCCA
GCGAAGGTCCGCCCTTCTCACCCGAAGATCTCCTGCAACTGCCTCCCTCC
ACTGGAACCTTCCAGGAGGAGTTCCTGCGAAAGTCCCAGCTGTACGCCGA
GGAGCTGATGAAACAGCAGATGCATCTAATGGCCGCCGCCAGGGTGAACG
CTCTCACGGCAGCGGCGGCGGGAAAACAGCTGCAAATGGCAATGGCGGCG
GCGGCGGTTGCCACAGTGCCCAGCGGTCAGGATGCACTGGCTCAGCTGAC
GGCCACGGCATTGGGTCTGGGACCCGGTGGAGCGGTGCATCCCCATCAGC
AATTGCTACTGCAAAGGGATCACTCCACCACCATCATCACATGCAGAATC
ACCTGAATAACAATGAAAATCTGCACGAAAGGGCGCTCAAATTCAGCATA
GACAATATCCTGAAGCGGACTTTGGTTCCAGATTGCCCAGATTGTGCTTT
AAGTGGCAATATCGGTGGTGCAGTGTAAGTGGGAGCAGTACTGGCAGCAG
TAAAATTCTGGAAATACCAATGCAACAGATCTCCCCCTAAAGGCGCCCAG
GAGTCGGGAAGCCACTGATCTTGGCCTCAAGTACGCCGCCGCCACTCGAG
CTTGAGCTTCTCCAGCTCGCTGGCGAATTATGCAGCACAGGCAACGATTC
CAATAGACCGCACCAGCCAGCAGCACGACGAAACCTCGGGCATCCATGGA
GTCTGGTCAAGCTTGCC
UFO07218.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:44:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| inv-RE | 4776 | CG17835-RE | 269..1435 | 9..1161 | 5150 | 97.4 | Plus |
| inv-RB | 2261 | CG17835-RB | 269..1435 | 9..1161 | 5150 | 97.4 | Plus |
| inv-RD | 3404 | CG17835-RD | 1412..2578 | 9..1161 | 5150 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:43:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11475976..11477111 | 9..1132 | 4745 | 97.4 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:43:59 has no hits.
UFO07218.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:42:50 Download gff for
UFO07218.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| inv-RA | 1412..2568 | 9..1150 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:00:56 Download gff for
UFO07218.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| inv-RD | 1412..2568 | 9..1150 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:50:24 Download gff for
UFO07218.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| inv-RD | 1412..2568 | 9..1150 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:50:24 Download gff for
UFO07218.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11475976..11477132 | 9..1150 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:00:56 Download gff for
UFO07218.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7363481..7364637 | 9..1150 | 97 | | Plus |
