UFO07219.5prime Sequence
1148 bp (1037 high quality bases) assembled on 2011-06-24
> UFO07219.5prime
CAGTCGACATGGAGTTCAGTGCGGATCTGAATGGCTTCAATGAGGACTCC
ATCGAACCCTGCCGGACTTGCGGAATTTACTTTACCATGGGAATGGACAT
GGACCAGGCGATTGTGAAGCCCATTTTCGGTTCGGATGACGCCGCCGTCG
CAGATATGGCGGAGATTCTCGAGCAAATGAATGATTGGAACATAAAGGTT
GCGAGGGAAGACGGACGACCGCAGTACATGTGCATCGCTTGCATTGCCGA
GTTTCACCGGCTGATTAAATTCAAGCGCAGCTGTGTGGAGACACAGGAGC
AGTTCGGCGAGCTCGAGTACCAGCGCGAACATAATGGCATCGTTATTAAA
CGGGAAATTGAGCCGGAGGAAGAGAAATTCTGCGGATTTATATATCTGGA
TACCGACGAGGAGGATAACAGCGACGAGGACGGTAGTAGACGCGTGTGTG
CCGTCTTCGACATACCGCATGTGCCCATTAAGGAGGAACACATGGCCCGA
GTGCCATTACAGAACAGTGACAAGTTTCAGCCACCCGAACCCAAAAATTT
TGCGTCGCCAGTCGACTCCAGATTCGACATGATAGACAACGATGCGTTAA
CGTCCGGCATGTTAGGACCGTCTATTGAGGATCTCTCCGGGACGGTCGAC
GATGGCACCGAAGATGAGGAGGAGGAGGAGGAGGAGATAGTCAGATTTAC
ATACGATGATGACAACGATGCGGCAGCCCCGCTTCCGCCCCCGCTTTACT
CGCCGGTTGTGTGTTGTAAGCTATGCTTTTACGAATCCCCCGACCAGGAT
GCGCATATGGAGCACATGCGCCGCACCCATCTCCTCAAGGACTGGGAATG
CCATATTTGCGGCAAAAGTTCACAATGCCCAAGAATCGCGCATCAAGTTT
CACATCAAGTATCACAAGCTACAGCGGCACGTTAAGTGTCCCGTTTGCGG
GTTCATCTGCAGCTCCAAGAGACCCCTCAAGGAGCACAGCAGCAGTGCAC
GTACGCCCAAGTGCAAATACTGTGAAAACTGGGAAAACGCCACTCTACAC
CCAATTGAAAAAGCACCTAGAAAGAGGGTGAGCGAACTGCCAGCCACTGA
AAATGGGACAGCTCAAGTACCTCCATCTCAATATCTATGGAGCAGGTC
UFO07219.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:44:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
E(var)3-9-RA | 2136 | CG11971-RA | 84..1192 | 8..1103 | 5035 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:44:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 8991792..8992631 | 1028..194 | 3830 | 98.5 | Minus |
3R | 32079331 | 3R | 8992673..8992866 | 201..8 | 970 | 100 | Minus |
Blast to na_te.dros performed 2014-11-26 23:44:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\Tom | 7060 | Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). | 2854..2899 | 1015..1058 | 117 | 78.7 | Plus |
UFO07219.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:42:51 Download gff for
UFO07219.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
E(var)3-9-RA | 71..1175 | 1..1091 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:00:59 Download gff for
UFO07219.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
E(var)3-9-RA | 75..1179 | 1..1091 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:50:25 Download gff for
UFO07219.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
E(var)3-9-RA | 75..1179 | 1..1091 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:50:25 Download gff for
UFO07219.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 8991790..8992627 | 198..1028 | 98 | <- | Minus |
3R | 8992677..8992869 | 1..197 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:00:59 Download gff for
UFO07219.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 4817512..4818349 | 198..1028 | 98 | <- | Minus |
arm_3R | 4818399..4818591 | 1..197 | 97 | | Minus |