UFO07222.5prime Sequence
1144 bp (1041 high quality bases) assembled on 2011-06-24
> UFO07222.5prime
CAGTCGACATGGCAAGTGCGAGCACTGAAAACGGCGAGGAGCTGATGAAT
TACGGCAGCAATTCGGATTCGGAGGAGTCCGAGTACTCGGAGAACGAGGA
TACCCAAGTTTGCGACAAGGATTCACAACAGAACAGCAATGCCGATTCGG
GCTATCCACTGGACTCGCCCGAACTACAGGACTCCAAGACGACGGGGCAA
AAGGGACAGAACAAAAGCGGTAAAACTAGCATCGGTGCAGTGCATCCGAA
CTATGGATTCGGCAAACGCTGGTCCAAGTCCGAGGATGTGTTGCTCAAGC
AGCTGGTGGAGACGCACGGTGAGAACTGGGAGATTATCGGACCGCATTTC
AAGGATCGCCTGGAACAGCAAGTGCAGCAGCGTTGGGCCAAAGTCCTCAA
TCCGGAGCTAATCAAGGGCCCGTGGACGCGGGACGAGGACGACATGGTTA
TTAAGCTGGTGCGCAACTTCGGGCCCAAGAAATGGACACTAATTGCACGA
TATCTGAACGGACGAATTGGGAAACAGTGCCGCGAGAGATGGCACAACCA
CCTCAATCCGAATATCAAGAAAACGGCCTGGACCGAAAAGGAGGACGAGA
TTATCTACCAGGCTCACTTGGAGCTGGGCAACCAGTGGGCAAAGATTGCC
AAACGTCTGCCCGGACGCACCGATAACGCCATTAAAAACCATTGGAATTC
AACAATGCGTCGCAAATATGACGTCGAACGCAGATCGGTTAATGCATCTG
GTAGCGATTTGAAGAGTTCGCGAACCCATCTCATCACGCTGATCAAGTCC
GGTGGCATCAGCAAGTGTATGAATAATATGCAACATAACAAGGAATCTGG
TGGTGAGGCAGTTAATAAATCCGAAAACGCCGATGGCGCTTCGGTTACTG
CCGTGAAAGTGGGTGATCTGGCACAGATCACAAGACGATCATCAAAAGGG
ATCCATCTGCACACCTCAGTATGCAGCATCTCATTAAGTTGACCATGCCG
CGCCAACACGATCATATTGAAGCGTAACGCAACAATCCCGAACTCACCAT
CAGCAGATGTTCATCAGTGAAACTTTCACAGGAGAGCCGCGAAACGCAGT
TCGCGACACCGAGTTCGCCGGTCAATCGCCATTAGTTCCTACCC
UFO07222.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:48:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Myb-RE | 2903 | CG9045-RE | 720..1864 | 9..1130 | 5095 | 97.4 | Plus |
| Myb-RD | 2865 | CG9045-RD | 657..1801 | 9..1130 | 5095 | 97.4 | Plus |
| Myb-RB | 2732 | CG9045-RB | 549..1693 | 9..1130 | 5095 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:48:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15856081..15857104 | 1026..9 | 4830 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:48:49 has no hits.
UFO07222.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:43:30 Download gff for
UFO07222.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Myb-RD | 655..1738 | 9..1078 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:03:20 Download gff for
UFO07222.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Myb-RD | 655..1738 | 9..1078 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:52:16 Download gff for
UFO07222.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Myb-RB | 549..1632 | 9..1078 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:52:16 Download gff for
UFO07222.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15856081..15857104 | 9..1026 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:03:20 Download gff for
UFO07222.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15750114..15751137 | 9..1026 | 99 | | Minus |
