UFO07225.5prime Sequence
1153 bp (1046 high quality bases) assembled on 2011-06-24
> UFO07225.5prime
CAGTCGACATGGCCAGTGTTTTCGATGAGTCTCATGAACCGGGCCTATCC
ATTGCGTACATAATATACAAGTGCACCGGCTGGCAAGTTGAGAAGCACGA
TCCACTGTCCAACACCATATGCAAGTCCTGTCTGGAGGATGCGCAGAATG
CATTCGATATCATAGAAACGTACGAGAGAAGTCACCAGTTTTACCGCTTC
CTCAAGGATGTACGGGAGGAGGAGAGTGAAAATGATGGATCCGGATGCTC
AGAAGAAGTGGAGGCAGCTGAGAGGGATCTCCAGGATGGTGCCGACGACG
TCGATTCCGGCAATGAACCTGATATTAACGAATGTGATATCAAGGCCAAG
GAGAAACCAGGCTTTAGCTGTTCTCACTGCCCTAAATCTTTTCAAGTAAA
ATCAAATCTGAAGGTACACATGCGTTCACACACAGGAGAACGTCCCTTCA
CGTGTTCCCTCTGCCCCAAGTCCTTTGGCTATAGCTCTGGTCTTCAGAAT
CACATGCGAACCCACACAGGAGAACGACCCTTCCAGTGCTCGCATTGCCC
AAGGTCCTTTACAGCTGGGCACCACCTCAAGGCCCACATACAGATGCACG
AAAGAAGAGGATCGTTAAGGTGCCCATACTGCCAAAAGTGCTTTCTAACT
TCTTTAATTCTCAAGCAGCATTTGGCCACGCACACTGATGAAACGCAGTT
CAAGTGTTCCCAGTGCTCGAAGTCCTTTCAAGTCGAACATGAACTTTGGA
TGCACATGCGGGTGCACCAAGAACGCCTCTTTACTTGTGGCCATTGCTCA
AAGGACTTTGCGCTACATGCGTATCTCAAGCGACACCTGTCAAGGAACGC
GAGATGCTCTCAAAGCTCAAAAGCATCTGCTCACAAACACTATGCCACTC
AAAGGCACTTAAGTGTGTAAGTGCCCAAAACTTTCACTGACCGTTCGGCT
CTGTCCACTCACTTGAAATCACACACCAAAATAGCCATTGCTCGAAGTCC
TTGCAATCTTCAGGATCTAGCGCACATAGTACGCCCCAAGAAACGTTTAT
GTTCAGCTGCCCAGACTTTTCGCGGAATCCGCACTGCTACACACTTGCAC
CCACCAGAACTGGGCCAATTCGCATGCAGCTTCAACTTGTTGGCCCGGTC
CAG
UFO07225.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:44:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Neu2-RA | 1308 | CG7204-RA | 157..1302 | 9..1126 | 5025 | 97.1 | Plus |
| Neu2-RB | 1126 | CG7204-RB | 157..1067 | 9..918 | 4500 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:44:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21488984..21490001 | 1019..9 | 4730 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:44:23 has no hits.
UFO07225.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:42:53 Download gff for
UFO07225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Neu2-RA | 13..1049 | 9..1034 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:01:08 Download gff for
UFO07225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Neu2-RA | 157..1193 | 9..1034 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:50:33 Download gff for
UFO07225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Neu2-RA | 157..1193 | 9..1034 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:50:33 Download gff for
UFO07225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21488965..21490001 | 9..1034 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:01:08 Download gff for
UFO07225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21482065..21483101 | 9..1034 | 98 | | Minus |
