UFO07226.5prime Sequence
1123 bp (984 high quality bases) assembled on 2011-06-24
> UFO07226.5prime
CAGTCGACATGTCGAGCGCGTCAAAGTCGACGCCGAGCGCTGCCAGCGGG
AGCTCCACGTCCGCAGCTGCCGCCGCCGCAGCCTCTGTCGCCTCAGGATC
CGCCTCGTCATCCGCCAACGTGCAGGAGTTCAAGATCCGCGTGCCCAAGA
TGCCCAAGAAGCACCATGTGATGCGGTTCAACGCCACGCTCAATGTGGAT
TTCGCGCAGTGGAGAAATGTGAAACTGGAGCGGGAAAACAACATGAAGGA
GTTCCGGGGCATGGAGGAGGATCAGCCCAAGTTTGGTGCTGGATCGGAGT
ACAACCGGGATCAGCGCGAGGAGGCGCGCCGCAAGAAGTTTGGCATTATA
GCGAGAAAGTACCGTCCAGAGGCACAGCCATGGATCCTTAAAGTGGGTGG
CAAGACTGGAAAGAAGTTCAAAGGCATCCGCGAGGGCGGCGTAGGCGAGA
ATGCAGCTTTCTATGTGTTCACCCATGCACCAGACGGCGCCATTGAGGCA
TACCCCTTGACCGAGTGGTACAACTTCCAGCCTATTCAGCGCTACAAATC
GCTGTCGGCGGAGGAGGCCGAACAGGAATTTGGTCGGCGCAAAAAGGTGA
TGAACTACTTCTCCCTTATGTTGCGAAAGCGTCTGCGCGGCGATGAGGAA
GAGGAGCAGGATCCGGAGGAGGCTAAGCTAATTAAGGCAGCCACCAAAAA
ATCCAAGGAGCTCAAGATCACTGACATGGATGAATGGATTGATTCCGAGG
ATGAGTCGGATTCGGAGGACGAGGAGGATAAAAAGAAGAAGGAGCACGAA
GACAGCGACGATGGCAAGGCCAAGGGAAAGGGCAAGAAGGCGCAGACAGA
AAAAGAAAAGAGGGATGTTGATGACGAGGCCTTCGAGGAGTCGGACGATG
GTGACGAGGAGGGCAGAGAAATGGACTACGACACCAGCTCCAGTGAAGAC
GACCAGATCCAGAGGCAAAGTGGACAGGACATGAAAGGCGGGCCGAGAGA
TGCCCTCCGCAGCTGCTTACCTCGATGAGAGAGATGATGAGAAGAAGTCT
GATGAAGTCGGACAGGAGATGCCGACGGCGAGAAAAAAAGATGATAGCAA
GGACAGGTATCCCAGGACAAGAA
UFO07226.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:44:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TfIIFalpha-RA | 1938 | CG10281-RA | 129..1262 | 8..1120 | 5070 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:44:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6380685..6381605 | 32..949 | 4440 | 99.6 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:44:28 has no hits.
UFO07226.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:42:54 Download gff for
UFO07226.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TfIIFalpha-RA | 129..1238 | 1..1097 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:01:10 Download gff for
UFO07226.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TfIIFalpha-RA | 121..1230 | 1..1097 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:50:35 Download gff for
UFO07226.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TfIIFalpha-RA | 121..1230 | 1..1097 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:50:35 Download gff for
UFO07226.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6380686..6381605 | 33..949 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:01:10 Download gff for
UFO07226.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2206408..2207327 | 33..949 | 99 | -> | Plus |
