UFO07231.5prime Sequence
1146 bp (1030 high quality bases) assembled on 2011-06-24
> UFO07231.5prime
CAGTCGACATGGAACGGAGTCATCTTTACTTGCCCACTCTGAGCTACGCG
GCCATGGGTCACGTATACGCACCGTATCGCGGAAGCAGTTCACCCGCACT
ATCGACAGCATCGTCAACATCATCGAAGCCGGAGCAGATCGAGGAGCTGG
TGTCCCAGCAGCTGCATCATCTCAAAATGCACTACGCCGACGAGGAGCAA
CGCTACGTAGACCAGATGCTCCTGGAGAATCCCATTGTTGTGGAGCGCCG
TGCACCGCCGCCGCTGAAAACGGAGCTTGCTATGGATTGCCGCGGATCGG
GTTCCGGATCAGGTTCCGGTTCTGGTTCGGATGTCAAGGATGCCCAGCGT
CAGAGGGCCGAGTCGTGCCGCAAATCCCGCTACAACAACAAGATCAAGAA
GGCCAAGCTGCGCTTCCGGCACAAATTCGTCAGCGGGCAGCTGAAGAAGA
GCGCCGTCATGTTGGACACGATGCGGGATGTGATTGCCCAGGCGGAGAGG
CAGCTGCTCGAGCGGGGATATCCCGCCGCCACACTCGAGCGGATGCGGGC
CACTTTCGGCCTGGAAATGGAGCAGGCAAGCTTTCTAGACCATTCGTTTG
GCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCAT
AATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTC
ACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGAT
GGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTC
GATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATT
CATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGACCT
GATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATATATTTGCCCAT
GGTGAAAACGGGGCGAGAGTGTCCATATTGCCACGTTTAAATCAAACTGT
GAAACTCCACCCAGGATTGCTGAAACGAAAACATATTCTCATAACCCTTT
AGGAATAGCAGTTCACGTACACGCCCATCTGGCGAATTTGTGTAGAACTG
CGGATCGTCTAATTCATCGACGATAAACGTTCAGTGCTATGGAACG
UFO07231.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:44:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| sisA-RA | 779 | CG1641-RA | 67..634 | 8..575 | 2840 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:44:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11321724..11322291 | 575..8 | 2840 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:44:38 has no hits.
UFO07231.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:42:55 Download gff for
UFO07231.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sisA-RA | 49..623 | 1..575 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:01:13 Download gff for
UFO07231.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sisA-RA | 60..634 | 1..575 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:50:39 Download gff for
UFO07231.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sisA-RA | 60..634 | 1..575 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:50:39 Download gff for
UFO07231.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11321724..11322294 | 1..575 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:01:13 Download gff for
UFO07231.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11215757..11216327 | 1..575 | 99 | | Minus |
