UFO07245.5prime Sequence
1136 bp (1034 high quality bases) assembled on 2011-06-24
> UFO07245.5prime
CAGTCGACATGTTGTGGATAATGGGGCTAGTAGTGGCCGCTGTGCGGCTC
AATGGACAGGCGAGCGGTGCGGCAAATGTCACGGTAATCGAAGACATTAG
GAGCGCCTTCAGAGGCGTCACCAACGACACGGAGCTGCTGAATCACATAA
TACCGGAAATGTACGGGGCGAGCATGCGCAGTGCGAATCCCTCCTTTGTC
TTCAAAATGCCTAGCAAATCGAACGGCGGTGGCGACGACTTCGAGCTGCT
AACAATGCAGCGATCCGATTTCGCGGAACCAATCTTCCCCAATATCAGCC
AGTCGGCCACGGCCATCGATTCACCCAGTACCATTCCGCCGGAAACGAGC
GTGAAGACCAGTCTCATGGTATCGCCGCAACAGGATTGGCAGCAGATGGG
TCTGGATGGCTGGACGGGGGAGCTGAAGCCACCAGTAGCCTCGCTGGAGC
AGGATCATAGGGACACTCGACCGCCGATCAGCTGGCAGAACTCGTATCCC
CACGACGAGATTCGTCTGGAGTTCCAGAACCACCACTTCGATGGCCGGGT
GACGGACATACGCGTGATAACACAAACAACTAGTAAACCAGCTGAGATGG
AGGACCTGATGAATGTTCAGAATGTGTACATAGCGCGGGTAAACGATCCC
TTCGGTTACTCCATGAAGTGGAGCTTCACCAACGACAGCAGCCGGGAAAA
AGAGCTTTTGCCGGAGGGAGATCGCGGAAAGAGGGACGTTGCTCGGCTGT
ACTCCATGATCAAGTGCTCCACGGGCTGTGATCCGCTGATCTACAAGGGC
TACGGCTGCTACTGCGGATTCGGTGGCCACGGAGTGCCCGCCGATGGCAT
CGATCGCTGTTGTCGCGTGCACGACAAGTGCTACTGTCAGAGCAACTGCA
TCTCCTATCTGGAATACTTTGTGCCCTACGTGTGAAGTGCTACCGCGGCA
AGCCGCTGTGCGCCGTCGATCATGGCGAGTTCGTGGCCCCGACTCTGTGC
CGCTCGTCCTCTGCAATGGCGACCTGCGGCTTTCCAGTGCTCAGAGTACT
ACTGCCCAACCCGCCGCTCCATTTGCCACTCCGTCCAGAATCTCGGACGC
TACGAACCTTAATTCTTCGAATGCAAGGCTTCAGAC
UFO07245.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:45:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14507-RC | 1233 | CG14507-RC | 47..1166 | 7..1120 | 5150 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:45:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29226310..29226938 | 1081..459 | 2660 | 96.7 | Minus |
| 3R | 32079331 | 3R | 29227225..29227679 | 461..7 | 2275 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:45:12 has no hits.
UFO07245.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:43:00 Download gff for
UFO07245.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14507-RC | 40..1166 | 1..1120 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:01:29 Download gff for
UFO07245.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14507-RC | 40..1166 | 1..1120 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:50:53 Download gff for
UFO07245.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14507-RC | 40..1166 | 1..1120 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:50:53 Download gff for
UFO07245.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29226271..29226936 | 461..1120 | 96 | <- | Minus |
| 3R | 29227226..29227682 | 1..460 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:01:29 Download gff for
UFO07245.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25051993..25052658 | 461..1120 | 96 | <- | Minus |
| arm_3R | 25052948..25053404 | 1..460 | 99 | | Minus |
