UFO07249.5prime Sequence
1122 bp (1012 high quality bases) assembled on 2011-06-24
> UFO07249.5prime
CAGTCGACATGGAAAACCAATATCAGCGCATAGTCAGCGCCACTGCACGC
GAGGATTCGCAGGCAAGGAGGAGCAAGCCCTTGTTTCTGAATGCCTGGTC
GCAGACTTCTAGCGTGGACTTCGAGGTGCTTCGCAGCATCTCCGCGCCGG
ACCCGCAAGTGGAGGTCGAGAACAGAGCGCTCCGCGATAAGGTCCGCTAC
TTGGAGGCCAAACTGCAGCAGCACAAGGATCTGCTATCCCAGATTCATGC
CACCTCCGCCAGGATGCAACAGGCATCCTCCCTGCTGGCAGAAAGTAGAC
CACCCACGCCGCCCGCGGTCCAGAGCCACCACATTCTCACGCCACCGAGT
TCAGAGATATGTGCGCCCGCGCAGAATCCCCAGATTCTGGACTACAAGAT
CATCTCGGCACCCGACGATGCGGATGCCATTGAGATTCGCCTGGCGGCGG
AGAGTCTGAACAGCCTGAGCACCTCTGCGGACTCAGATCGCCTGGAGATT
TGCCTGGGCGACGAGAATCATCAGCAGAGCAATCATCACAATTCCCAGCA
GCAGTACAGGATTAGCAACGGCATAAAGAGGGATGGTTCCTCCGAGTCCG
CCGACACTCCACTACAGTTCATCAAACGCCGCAAGCTGCAGGAGATTCAG
TTGCAGGAAGAAATCCCGCGGCAGAACATAAAACTACCAGCCAAACCCCA
AGTCAAAGCCCGTAATGGCAGTTTTACCGATCTCAACAAGGGCCAACAGC
AAAACATGGACAACGTGATGGTGTCCATTGGCCCGAACAACACCTGTGTG
CCCGCCAGTGTCTTCGAGAATATTAACTGGTCGGTGTGCTCGCTGGCCAC
CCGGAAACTACTGGTCACGATCTTCGACCGGGAAACTCTGGCCACCCATT
CGATGACGGGCAAGCCGTCGCCCGCCTTCAAGGATCAGGACAGCCGCTCA
GCGAATGCTCGATCTGGGAGATCCAGGACATCATATTCGCGTGACGCACA
AGTGTATGCCAGGTGAGAAGGAGGTGCGCACGGCATCACCACCAAGTTGG
CGACGAGAACAGATGATGAGATCCAGAACGTCAGCGAGCAACATGCATCA
ACCGGCAAGACCTATTGCAGCT
UFO07249.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:45:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| insv-RB | 1335 | CG3227-RB | 32..1117 | 7..1083 | 5115 | 98.7 | Plus |
| insv-RA | 1654 | CG3227-RA | 351..1436 | 7..1083 | 5115 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:45:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2575498..2576572 | 1083..18 | 4810 | 98.2 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:45:24 has no hits.
UFO07249.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:43:02 Download gff for
UFO07249.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3227-RA | 354..1467 | 1..1101 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:01:36 Download gff for
UFO07249.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| insv-RA | 345..1458 | 1..1101 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:50:59 Download gff for
UFO07249.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| insv-RA | 345..1458 | 1..1101 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:50:59 Download gff for
UFO07249.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2575476..2576572 | 18..1101 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:01:36 Download gff for
UFO07249.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2575476..2576572 | 18..1101 | 98 | | Minus |
