UFO07252.5prime Sequence
1143 bp (1025 high quality bases) assembled on 2011-06-24
> UFO07252.5prime
CAGTCGACATGCAGTGGCTCAAAATGAAGCTTCGCTTCGTAAACTTAATT
TTACTATTAATAAGCTCAACATGTGCCCAATTGGGGGGCGATCCCAATGG
CTACCTCACCTACTGTCCGTGTATGGGACGCTTTGGCAACCAGGCCGACC
ACTTCCTGGGATCATTGGCCTTCGCCAAGGCGCTTAATCGCACCCTGATC
CTGCCGCCGTGGGTGGAGTATCGTAGGGGTGAACTGCGATCCCGTCAGGT
ACCGTTCAACACATATTTTGAAGTGGAGCCCCTGAAGGAATACCATCGCG
TCATCACCATGGCAGATTTCATGTGGCACCTGGCCGACGACATTTGGCCA
GAATCGGAGCGAGTGTCATTTTGCTACAAGGAACGATATAGCCTTCAGCA
GGAGAAGAACGATCCAGACAAGCCCAATTGCCACGCCAAGGATGGCAATC
CTTTTGGTCCCTTTTGGGACACTTTTCACATAGACTTTGTGCGGTCAGAG
TTCTATGCGCCACTTCATTTTGATGTGCATCATAGCAACGAGGCTGCCAA
GTGGCAGACCAAATATCCTGCAGAATCATATCCCGTACTCGCGTTCACCG
GAGCTCCGGCTAGTTTTCCTGTTCAGCTAGAGAACTGCAAGCTGCAGCGC
TACTTGCAGTGGAGTCAACGGTATAGGGAAGCATCTAAGGATTTCATCCG
AGAGCAGTTGCCTCGGGGTGCCTTTTTGGGCATTCATCTGCGCAACGGTA
TCGATTGGGTGAGAGCCTGTGAGCACGTCAAGGATAGCCAGCATCTGTTT
GCCTCGCCGCAGTGCTTGGGCTATAAAAATGAACGTGGTGCACTCTACCC
GGAGCTCTGCATGCCCTCCAAGGAGCGATCATCCGCCAGCTAAAGAGAAC
CATTAAGACGTGCGCCAAACTCAGCCGGACACGAAATCAAATCAGTTTTC
GTGCGTCAGACTCCATCACATGATTGGTGAACTAAACACGTCCTTAGTCG
CATGGGCATCAGTGGTGCCACAAGCTGCGAGATGATCCTACTGGACTGCC
ATTCTCGAACGGTCGACACTTATCGCACTGTATTTCCTCTTACTCGCATC
GAAAAGAAACGGAGTTGCACGTTCCACTCGGACTCTGGGATTC
UFO07252.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:45:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| O-fut1-RB | 1570 | CG12366-RB | 34..1148 | 9..1105 | 5005 | 97.7 | Plus |
| O-fut1-RA | 1337 | CG12366-RA | 34..1148 | 9..1105 | 5005 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:45:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14161635..14162529 | 126..1014 | 4160 | 99.2 | Plus |
| 2R | 25286936 | 2R | 14161463..14161581 | 9..127 | 595 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:45:33 has no hits.
UFO07252.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:43:03 Download gff for
UFO07252.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| O-fut1-RA | 21..1040 | 1..1014 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:01:40 Download gff for
UFO07252.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| O-fut1-RA | 26..1045 | 1..1014 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:51:02 Download gff for
UFO07252.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| O-fut1-RA | 26..1045 | 1..1014 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:51:02 Download gff for
UFO07252.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14161455..14161580 | 1..126 | 96 | -> | Plus |
| 2R | 14161636..14162529 | 127..1014 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:01:40 Download gff for
UFO07252.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10048960..10049085 | 1..126 | 96 | -> | Plus |
| arm_2R | 10049141..10050034 | 127..1014 | 99 | == | Plus |
