UFO07257.5prime Sequence
1124 bp (1034 high quality bases) assembled on 2011-06-24
> UFO07257.5prime
CAGTCGACATGGTGGACTACAGCAAGTGGAAGAACATCGAGATTTCGGAT
GATGAGGACGACACTCACCCGAACATAGACACGCCTTCTCTGTTCCGCTG
GCGGCACCAGGCGCGCGTGGAGCGCATGGCGGAGATGGACCACGAGAAGG
ACGAGCTTAAGAAAAAGCGCCAGAGCTACCAGGCGCGCCTCATGGACGTC
AAGGAGCGGATCTCAAAGAAGGATGGCGACGAGGAGGCCCTGAAGAAAGA
GCTCGAAAAGATCGAGGCCGAGGGCAAAGAGCTGGACCGCATCGAGAGCG
AGATGATTAAGAAGGAAAAGAAAACACCCTGGAACGTGGACACCATCAGC
AAGCCCGGCTTTGAGAAGACCGTAATCAACAAGAAGGCCGGCCGCAAGCC
GGATGAGAATCTGTCCGAGGAAGAGCGAGAGCAGCGCATGAAGCAATTCG
TCAAGGAGAACGAGAAGCTCTGCCAACAGTATGGCATGCTGCGCAAGTAC
GACGATTCGAAGCGGTTTCTGCAGGAGCATCTTCACTTGGTGGGCGAGGA
GACGGCCAACTACCTAGTCATTTGGTCCATCAATCTGGAAATGGAGGAGA
AGCACGAGCTGATGGCCCACGTGGCGCATCAGTGCATTTGCATGCAGTAC
ATTCTAGAGTTGGCCAAACAGCTGGACGTGGATCCTCGCGCCTGTGTCAG
CTCCTTCTTCTCAAAGATCCAGCACTGTCATCCCGAGTACCGCGCGCAGT
TCGACAGCGAGATCGAAGGTTTCAAAGGACGTATCCAGAAGCGTGCGCAG
GAGAAGATCCAGGAGGCGATAGCCCAGGCCGAAGAGGAGGAGCGCAAGGA
GCGCCTCGGACCTGGTGGTCTGGACCCAGCCGATGTCTTTGAATCCCTGC
CCGATGAACTAAGGCCTGTTTCGAGTCCCGCGACGTAGAGCTGCTGCAGA
GACCATTGCGCCATGCCCGTGACGTCGCCAAGCTGCACATGAAGCGTTGT
GTGACTCTGGTCTCTGGGTGCCATGCGCTGACTTGAAGGGTGACAAGAAG
AGAGATGACTCGATGACGTCCCGGTGCAAGGAAAAACGACATGCTATCAA
GAAGTGCACCAGGAGGATCACTAA
UFO07257.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:45:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cdc37-RA | 1611 | CG12019-RA | 309..1389 | 9..1076 | 5040 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:45:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1796176..1796838 | 244..906 | 3285 | 99.7 | Plus |
| 3L | 28110227 | 3L | 1795791..1795996 | 40..245 | 1015 | 99.5 | Plus |
| 3L | 28110227 | 3L | 1796908..1797054 | 911..1050 | 405 | 94.6 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:45:51 has no hits.
UFO07257.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:43:06 Download gff for
UFO07257.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cdc37-RA | 268..1355 | 1..1076 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:01:49 Download gff for
UFO07257.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cdc37-RA | 302..1389 | 1..1076 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:51:09 Download gff for
UFO07257.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cdc37-RA | 302..1389 | 1..1076 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:51:09 Download gff for
UFO07257.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1795693..1795732 | 1..41 | 92 | -> | Plus |
| 3L | 1795793..1795996 | 42..245 | 99 | -> | Plus |
| 3L | 1796178..1796837 | 246..905 | 99 | -> | Plus |
| 3L | 1796902..1797085 | 906..1076 | 92 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:01:49 Download gff for
UFO07257.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1795793..1795996 | 42..245 | 99 | -> | Plus |
| arm_3L | 1795693..1795732 | 1..41 | 92 | -> | Plus |
| arm_3L | 1796178..1796837 | 246..905 | 99 | -> | Plus |
| arm_3L | 1796902..1797085 | 906..1076 | 92 | | Plus |
