Clone UFO07262 Report

Search the DGRC for UFO07262

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:72
Well:62
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcriptscyl-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO07262.5prime Sequence

1146 bp (1041 high quality bases) assembled on 2011-06-24

> UFO07262.5prime
CAGTCGACATGAAAATGGATGTTATTGCTCGGGAACAAATCATCTACGGT
AGCCTGCAGGGATCAAACAAAAATAAAGATTGGACCAGCAGACTGCCACC
GCCGTCGGCATACACTCTGGACCTGATGTCCAAGAAGGCCAAGACGACAA
CCGGGGGCAGCAGCAATGGCAGCAATGCTACCGCCACATCCACAACCACA
TCCACATCCAGCAGTATTAAGCACAAGCAGCCGGCGGGCAGCAGCAACAA
CAATGTTGGCCAAAGTCAGAGCAAGAAGACAAAGCCCAGCGGCAGCTATA
ATAGCAATAGCAACTACTACTACTACGCTGCTGACGAGGAGGAGGGCGGT
AGCGCTGACTATGCACTGAGCAACTACGATAAGAAGGCTGTCGAGGAGCT
GTCCCTGCGATTGCTCGACGAACTGAGGGCGGCCAAGTCGCGTCATTTGA
CCTGTACGGAAGTGTCGCTACCCTGTGATCTCACGCCGAGCGTGGCCCGG
GAAATAATCCGCGTGTCGGAGAAGGAGCCCCGCGGCATACGCGGCTGCAC
CATCTACATTGAGTTCGAGGATGAGCCGAAGAATTCGCGTCGCATTGCCT
CGATCAAGGTCGATTCGGATACGGTGTCCACATTCGAAGTGTATCTGACC
CTCAGGCAGGATCATCGCGGCTGGACGTCGCTGTTGCCGCAGTTCATGAA
GAGTTTGGCCCGCACGATCACCATCAGTCCGGAGTATACGATCACCAAGA
ATAAGCTATATTCCGCTGATGGTTTGGGTGCACGCACGAGCTATAGCTTC
GGCAGCCACGCCCATAGACCCAGTGCGGCCATCGCCACGCCCACCAACGC
AAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATA
ATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGG
TCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCACCG
AGCGTTCTGAACAATTCAGATGGAGTTCTGAGTCATTACTGAATTTATCA
ACAGGGTCCAAGGCGAGCTCGATTCAAATTACGGCCCGCCCTGCACTCAA
TCCGTACTGTTGTAAATCTATTAGCATTCGCCCCGACTGGAAGCCA

UFO07262.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:46:07
Subject Length Description Subject Range Query Range Score Percent Strand
scyl-RC 3124 CG7590-RC 585..1424 9..848 4185 99.9 Plus
scyl-RA 2195 CG7590-RA 585..1424 9..848 4185 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:46:04
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11253701..11254472 77..848 3845 99.9 Plus
3L 28110227 3L 11252891..11252960 9..78 350 100 Plus
Blast to na_te.dros performed 2014-11-26 23:46:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2305..2472 156..326 207 61 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2291..2448 168..326 179 61.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6713..6868 173..326 143 60.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6757..6845 238..323 131 64 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6736..6809 238..314 126 64.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2314..2409 220..317 116 59.2 Plus

UFO07262.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:43:08 Download gff for UFO07262.5prime
Subject Subject Range Query Range Percent Splice Strand
scyl-RA 580..1424 5..852 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:01:54 Download gff for UFO07262.5prime
Subject Subject Range Query Range Percent Splice Strand
scyl-RA 583..1427 5..852 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:51:15 Download gff for UFO07262.5prime
Subject Subject Range Query Range Percent Splice Strand
scyl-RA 583..1427 5..852 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:51:15 Download gff for UFO07262.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 11252889..11252960 5..78 97 -> Plus
3L 11253703..11254475 79..852 99 == Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:01:54 Download gff for UFO07262.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11245989..11246060 5..78 97 -> Plus
arm_3L 11246803..11247575 79..852 99 == Plus