UFO07266.5prime Sequence
1117 bp (1007 high quality bases) assembled on 2011-06-24
> UFO07266.5prime
CAGTCGACATGGCGTCCGCAGGAAAGAAGGGCAAAAAGAATAAAGGAACA
GTTATCTCCTTGCAATCATTTCTATGTAATTCTGACGCTCCAGTCGGAAC
AACCCAAGTCTCAAAAAAAATACGAAATTTAGATGGCGATGATAGCGATG
ATGGAAGTGGTACATTGCCGTTGGTTTATCAGCTTCCAACCGCTCCGAGG
GCAAATCGGATATTCGACGATAATTCTATTCCTCATAAAGCCCCATTTAT
TGCTTATATCAATAATTTACCATTTGACGCAAATGAAGATGACCTCTACG
AGTTCTTTGAAGGTATTAATTTAATATCTCTGAGACTACCAAGAGAAGAT
GGCGAAAATGGTCGTTCCAGAGGCTTTGGCTATGTGGAGTTGGAAAATCG
AGAGGATTTAATTCATGTACTTAGCTTGCCAGACCCCTCTATTAAAGGTC
GCCGCATTCGCATTGAGCTATCGAATGAAAACGACCAGCAAAGCCGCCAA
AAAAGTAATAGGCGGTTTGATGGTTTTGGAAATAATGGAGATAATAGGGA
TTCCGGAAATTGGAGGCGAGACAGCCAAAACAACGGCAGTAACTTTGGTT
ATTCTTCCAATTTTGAAAGAAGCTTTAATAGAGAGAGAAAATCTTTACCA
GATAGAGATGATGTGAACACTCCTGGATCTTGGCGCACGAGCGCAAGGCC
GCAATCTATTGATACTTCCCCTACACGCAGAGAAGTTGAACAAGTATCTG
AAAAATATCGCGAAGGTCGAGTCAAAATAGCAGACAGATATTCCCGAGAA
GAGACATCCAAAGTTGAAGAAGAAAGGCCAAATTGAATTTAAAACCAAGA
ACTTTACCATTGCCAGATGTAAAGACATTGAATTCGAAAATGTGACGTTG
ATGAATTTATTTGGATAACAAGCGGACTTCATCATTAACGTGTTTGGGTC
TGCAAACGTAGATACAGCAGCAAGGAGTGGAAATTGAGCAAGATGCTCTC
GCTCGAAAACAGATAGGGCGCAGAGAACAGTAAATGAAACTGCGGCTTCA
GTGATAAATGATATGAAGTCTAATGCACGTAGTGGCCAGGAATCAGGACT
GCAGGAGGCGACTTATA
UFO07266.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:46:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eIF-4B-RF | 1443 | CG10837-RF | 69..1109 | 9..1030 | 4745 | 98.1 | Plus |
| eIF-4B-RA | 1651 | CG10837-RA | 69..1109 | 9..1030 | 4745 | 98.1 | Plus |
| eIF-4B-RB | 1504 | CG10837-RB | 69..1109 | 9..1030 | 4745 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:46:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 27547882..27548849 | 975..19 | 4350 | 98.6 | Minus |
| 3L | 28110227 | 3L | 27856971..27857938 | 975..19 | 4350 | 98.6 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:46:24 has no hits.
UFO07266.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:43:10 Download gff for
UFO07266.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF-4B-RA | 67..1128 | 1..1039 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:02:04 Download gff for
UFO07266.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF-4B-RB | 61..1122 | 1..1039 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:51:22 Download gff for
UFO07266.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF-4B-RB | 61..1122 | 1..1039 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:51:22 Download gff for
UFO07266.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 27856895..27857938 | 19..1039 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:02:04 Download gff for
UFO07266.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2RHet | 2902091..2903134 | 19..1039 | 97 | | Plus |
