UFO07285.5prime Sequence
1088 bp (997 high quality bases) assembled on 2011-06-24
> UFO07285.5prime
CAGTCGACATGTTGTGCTTCGACTCGGAGAGGATGAACTGGTACTACCAC
GTCCTGGCCAGGCGTCCCTACCTGGTGGTCGTCTCCATTGCTGTCTACTG
TGTCGCTTGCATCATCGTGGCCCTCGTCCTGAACAAGCTGCCGGACTTCA
GTGATCCCACCTTGGGCTTCGAAACCCGCGGCACCAAAATTGGAGAACGA
CTGACGGCCTGGTACAACCTGCTGCAAGAGACTGACCACCATGGTGCTCT
TTTCTCAAATCCATCGGATCTGTGGGAGAGGAGACGGGTAGAGCAGGGCT
ATGTGGAGACGAAGCTGCATCCGAATCACAGGCGACGCAAAAACAAGCAC
AAGAACAGAAACAAGAACAAGCGACGCAAGGAACAAAATCAAAGCAGCCA
CGAGCATCACGATGTGGCGCAGAAGATGATGCAGTTCAAAAAACGGCTGA
AGGCTACTAGTTCTCCCTCTCCAAATCTCGGCTTTGACACCTGGATCGGG
GACAGTGGAGTATTTCGCGACTACGAGATTACAAACGACAGCGCTTCCTC
CTCTTTGGAACCCACGCGACGCACTGAGCAAATCGAATATGGCCACAACA
CCACCTCAGTGGACGAGGAAGAGCATCAGCAGCGGGTGCAGACCAAGAAG
AGCACTTGGCGGCTCCTAAAGCAAGCCGCCACCTTGCCCACCGACGGTTG
GGCAGACATGCATCGTCGCCAACCCATCGAGGGATTCTTTTGCGATTCAT
CGCCCCGGAAGGAGTACTCTCATTTTGTGGTCCAGCGGATCGGTCCCAAC
GCCACCGATTCTCTATTTGATTTGAACGGACTGCTGGCCATGTGTCAGTT
GCACGATCAGATTACCGAAGTCCCCAGCTACCGGGCATTTTGCGAGCCGG
AGATGCTTACCACCGAGTGCTGCCGGCCATGGTCACTGCCAACTACGCGC
ATGCTGGCAACAAAAGTTCTGTTCGACTTACCACGGAGATGTACTCGCTG
CACACGCTGCTCTGGCTGCTATGAGTACTCAATGAACTAAGATGACACAC
TGCACGATACGGCATTGTCCTGTCTCTGAATGCACGCT
UFO07285.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:47:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| disp-RA | 4884 | CG2019-RA | 401..1484 | 6..1069 | 4890 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:47:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5854576..5855352 | 940..164 | 3870 | 99.9 | Minus |
| 3R | 32079331 | 3R | 5855752..5855911 | 165..6 | 800 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:47:39 has no hits.
UFO07285.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:43:21 Download gff for
UFO07285.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| disp-RA | 396..1457 | 1..1047 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:02:43 Download gff for
UFO07285.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| disp-RA | 396..1457 | 1..1047 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:51:49 Download gff for
UFO07285.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| disp-RA | 396..1457 | 1..1047 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:51:49 Download gff for
UFO07285.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5854454..5855351 | 165..1047 | 97 | <- | Minus |
| 3R | 5855753..5855913 | 1..164 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:02:43 Download gff for
UFO07285.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1680176..1681073 | 165..1047 | 97 | <- | Minus |
| arm_3R | 1681475..1681635 | 1..164 | 98 | | Minus |
