UFO07286.5prime Sequence
1128 bp (1042 high quality bases) assembled on 2011-06-24
> UFO07286.5prime
CAGTCGACATGAGTATGTCGCGCGGCGGCAACACAACTCTGGACTTGCAG
CCGCTCCTGGCGGAGAGCGATGTCGGAAACAGGGAGCTGGAGGAGAAGAT
GGGCGGATCGGCGGATCGGTCATCGCTGCTCGATGGATCCGGTTCGAAGG
AGCTGAGTCACCGGGAACGCGAGGACTCGGCGTTGTTCGTCAAGAAGATC
GGGAGCGCCTTGTTCTATGGCTTGTCCTCCTTCATGATTACGGTGGTAAA
CAAGACGGTGCTTACCTCCTACCACTTCCCCTCGTTCCTGTTCCTCAGCC
TCGGGCAACTTACTGCTAGCATTGTGGTCCTGGGCATGGGCAAGCGCCTG
AAATTGGTGAACTTTCCCCCTCTGCAGAGGAATACCTTCGCCAAGATCTT
TCCGCTGCCACTGATATTTCTGGGAAACATGATGTTTGGACTGGGTGGCA
CAAAAACCTTGAGTCTGCCCATGTTCGCAGCCCTACGACGCTTCTCTATC
CTGATGACCATGCTGCTGGAGCTCAAGATCCTGGGACTGCGACCTTCGAA
TGCGGTTCAGGTCAGCGTATACGCAATGATCGGTGGAGCGCTGCTGGCCG
CCTCTGATGATCTGTCCTTCAACATGAGGGGCTACATCTATGTGATGATC
ACTAACGCCTTGACCGCCTCGAATGGCGTATATGTGAAGAAAAAACTCGA
CACCTCGGAGATCGGAAAGTACGGCCTAATGTACTACAACTCGCTGTTTA
TGTTTCTGCCTGCCCTGGCCCTCAACTATGTTACAGGGAATCTAGATCAG
CGCTGAACTTTGAACAATGGAATGACTCAGTGTTTGTGGTGCAGTTCCTG
CTCAGTTGCGTTATGGGTTTCATCCTATCGTACAGCACCATCCTGTGCAC
GCAATTCAACTCGGCGCTGACCACCACCATTGTGGGATGCCTGAAAAACA
TCTGCGTAACATATCTGGGCATGTTCATTGGAGGCGACTACGTCTTCTCG
TGCTCAACTGTATGGATCAACAATCAGCGTGCTGCTAGTCTGCTCTACAC
GTACGTCACTTTCGCGAGCGGGCTCCGAAAAGCAAGAACCCTGCAGCACC
GCGGCGAAAATTCCAAGCCTTCGAACAT
UFO07286.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:47:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32174-RC | 3871 | CG32174-RC | 216..1331 | 9..1111 | 5165 | 98.2 | Plus |
| frc-RB | 3871 | CG3874-RB | 216..1331 | 9..1111 | 5165 | 98.2 | Plus |
| frc-RA | 1609 | CG3874-RA | 216..1331 | 9..1111 | 5165 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:47:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17431918..17432975 | 1062..9 | 5030 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:47:44 has no hits.
UFO07286.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:43:21 Download gff for
UFO07286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32174-RC | 211..1286 | 9..1076 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:02:46 Download gff for
UFO07286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| frc-RA | 216..1291 | 9..1076 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:51:52 Download gff for
UFO07286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| frc-RA | 216..1291 | 9..1076 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:51:52 Download gff for
UFO07286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17431900..17432975 | 9..1076 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:02:46 Download gff for
UFO07286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17425000..17426075 | 9..1076 | 99 | | Minus |
