UFO07287.5prime Sequence
1116 bp (1010 high quality bases) assembled on 2011-06-24
> UFO07287.5prime
CAGTCGACATGGTGCGATTCGAGACAAGGGACGGCCGTACGATAAGCGTA
AATCTGGCTCTGCTCGAGAAATCCTTGGTGATCCGGGAGATGTGCCGCGT
TGGCCAGGTCCCAGAGGATGAGGACTTCGTCCTGCCGCTGCACGGTATAC
ACAGCAATGTCCTGCTGAAGATCTTGCTGTGGGCTGAGTACCATGAGAAA
CACGAAGAGCCCGCCTGGGTGGACAGCAAAGATCCTCTTCCGGCCGAGGA
GATTGAGCTGCAGATCTCCGATTGGGACAAGGAGTTCCTGCGCGTGGAAA
TCGATAGCATTTGCAAAATCATGGAGGGCTGCAACTACTTGGACATCCCT
TGGCTCTACAAGCTCTGTGCCCAGAAACTCGTCTTCCTCAGCAGCCGAGA
GCCGGAGACGCAGTTCAGCGGTTACGTGGAGAAGATCCCAAGATTCCAGG
ATCATTTCATTGAGCAAATTCAAAAGGAAGCAAGCTTTCTAGACCATTCG
TTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAA
TCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGAT
TCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCC
AGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGA
GCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGT
AATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATG
AACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATT
TGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTT
AAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACAT
ATTCTCAATAAACCCTTTAGGAATAGCCAGGTTTCACCGTAACACGCCAC
ATCTTGCGAATAAAATGTTGTAGAACTGCGAAATCGTCTGTATTCACTCC
AGAAGCGATGAAAACGTTCAGTGCTCATGAAACGGTGTAACAGTGACTAT
CATATCACAGCTCAAC
UFO07287.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:47:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15800-RA | 614 | CG15800-RA | 36..506 | 9..479 | 2340 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:47:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23790722..23791192 | 479..9 | 2340 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:47:48 has no hits.
UFO07287.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:43:22 Download gff for
UFO07287.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15800-RA | 1..475 | 9..484 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:02:48 Download gff for
UFO07287.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15800-RA | 31..506 | 1..479 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:51:54 Download gff for
UFO07287.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15800-RA | 31..506 | 1..479 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:51:54 Download gff for
UFO07287.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23790722..23791197 | 1..479 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:02:48 Download gff for
UFO07287.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19678245..19678720 | 1..479 | 98 | | Minus |
